Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt galS and mglB are separated by 278 nucleotides mglB and mglA are separated by 60 nucleotides
OKFHMN_23525: galS - HTH-type transcriptional regulator GalS, at 4,596,696 to 4,597,736
galS
OKFHMN_23530: mglB - galactose/glucose ABC transporter substrate-binding protein MglB, at 4,598,015 to 4,599,013
mglB
OKFHMN_23535: mglA - galactose/methyl galactoside ABC transporter ATP-binding protein MglA, at 4,599,074 to 4,600,594
mglA
Position (kb)
4598
4599
4600 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4597.044 kb on - strand, within galS at 4597.123 kb on + strand, within galS at 4597.278 kb on - strand, within galS at 4597.426 kb on - strand, within galS at 4597.463 kb on - strand, within galS at 4597.463 kb on - strand, within galS at 4597.463 kb on - strand, within galS at 4597.517 kb on + strand, within galS at 4597.712 kb on + strand at 4597.787 kb on - strand at 4597.859 kb on + strand at 4597.870 kb on - strand at 4597.956 kb on - strand at 4598.011 kb on + strand at 4598.020 kb on + strand at 4598.113 kb on + strand at 4598.113 kb on + strand at 4598.117 kb on + strand, within mglB at 4598.118 kb on - strand, within mglB at 4598.131 kb on + strand, within mglB at 4598.131 kb on + strand, within mglB at 4598.131 kb on + strand, within mglB at 4598.132 kb on - strand, within mglB at 4598.244 kb on + strand, within mglB at 4598.244 kb on + strand, within mglB at 4598.245 kb on - strand, within mglB at 4598.353 kb on + strand, within mglB at 4598.857 kb on + strand, within mglB at 4598.976 kb on + strand at 4599.074 kb on - strand at 4599.108 kb on - strand at 4599.151 kb on + strand at 4599.685 kb on + strand, within mglA at 4599.685 kb on + strand, within mglA at 4599.877 kb on - strand, within mglA at 4599.880 kb on + strand, within mglA
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,597,044 - galS OKFHMN_23525 0.33 -1.6 4,597,123 + galS OKFHMN_23525 0.41 +0.3 4,597,278 - galS OKFHMN_23525 0.56 -0.6 4,597,426 - galS OKFHMN_23525 0.70 +0.8 4,597,463 - galS OKFHMN_23525 0.74 +0.8 4,597,463 - galS OKFHMN_23525 0.74 -1.0 4,597,463 - galS OKFHMN_23525 0.74 -0.5 4,597,517 + galS OKFHMN_23525 0.79 +0.6 4,597,712 + +0.4 4,597,787 - +0.0 4,597,859 + +0.4 4,597,870 - +1.6 4,597,956 - +1.3 4,598,011 + -0.3 4,598,020 + +0.3 4,598,113 + -0.5 4,598,113 + +0.2 4,598,117 + mglB OKFHMN_23530 0.10 -2.9 4,598,118 - mglB OKFHMN_23530 0.10 +1.6 4,598,131 + mglB OKFHMN_23530 0.12 -0.1 4,598,131 + mglB OKFHMN_23530 0.12 -2.0 4,598,131 + mglB OKFHMN_23530 0.12 +0.5 4,598,132 - mglB OKFHMN_23530 0.12 -0.3 4,598,244 + mglB OKFHMN_23530 0.23 -0.2 4,598,244 + mglB OKFHMN_23530 0.23 +1.5 4,598,245 - mglB OKFHMN_23530 0.23 +0.8 4,598,353 + mglB OKFHMN_23530 0.34 +1.0 4,598,857 + mglB OKFHMN_23530 0.84 +0.1 4,598,976 + +0.9 4,599,074 - -1.2 4,599,108 - -1.8 4,599,151 + -0.5 4,599,685 + mglA OKFHMN_23535 0.40 +0.6 4,599,685 + mglA OKFHMN_23535 0.40 -0.3 4,599,877 - mglA OKFHMN_23535 0.53 +0.1 4,599,880 + mglA OKFHMN_23535 0.53 +0.2
Or see this region's nucleotide sequence