Strain Fitness in Escherichia coli ECRC100 around OKFHMN_19625

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,810,320	+	ghxQ	OKFHMN_19620	0.41	+1.6
3,810,382	+	ghxQ	OKFHMN_19620	0.46	-1.1
3,810,382	+	ghxQ	OKFHMN_19620	0.46	+1.5
3,810,383	-	ghxQ	OKFHMN_19620	0.46	+0.0
3,810,473	-	ghxQ	OKFHMN_19620	0.53	-0.6
3,810,616	+	ghxQ	OKFHMN_19620	0.63	+0.5
3,810,671	-	ghxQ	OKFHMN_19620	0.67	-0.0
3,810,697	+	ghxQ	OKFHMN_19620	0.69	+0.7
3,810,702	-	ghxQ	OKFHMN_19620	0.69	-1.9
3,810,702	-	ghxQ	OKFHMN_19620	0.69	+1.0
3,810,713	-	ghxQ	OKFHMN_19620	0.70	+0.7
3,811,016	+				-0.3
3,811,017	-				-0.3
3,811,060	-				+0.1
3,811,104	-				+0.5
3,811,120	+				-1.0
3,811,120	+				-2.5
3,811,121	-				-0.2
3,811,121	-				+1.4
3,811,151	+				+0.0
3,811,157	+				+0.9
3,811,158	-				-1.6
3,811,282	+				+0.1
3,811,283	-				+0.2
3,811,429	+	guaD	OKFHMN_19625	0.21	-0.7
3,811,516	-	guaD	OKFHMN_19625	0.27	+0.3
3,811,691	+	guaD	OKFHMN_19625	0.41	+0.4
3,811,691	+	guaD	OKFHMN_19625	0.41	+0.4
3,811,692	-	guaD	OKFHMN_19625	0.41	-2.0
3,811,771	-	guaD	OKFHMN_19625	0.47	-0.3
3,811,771	-	guaD	OKFHMN_19625	0.47	-0.3
3,811,775	-	guaD	OKFHMN_19625	0.47	+0.7
3,811,867	+	guaD	OKFHMN_19625	0.54	+0.4
3,811,867	+	guaD	OKFHMN_19625	0.54	+0.6
3,811,868	-	guaD	OKFHMN_19625	0.54	+0.0
3,811,868	-	guaD	OKFHMN_19625	0.54	-0.3
3,811,868	-	guaD	OKFHMN_19625	0.54	-0.6
3,811,996	-	guaD	OKFHMN_19625	0.64	-0.7
3,812,002	-	guaD	OKFHMN_19625	0.64	+0.7
3,812,128	+	guaD	OKFHMN_19625	0.74	+0.0
3,812,138	+	guaD	OKFHMN_19625	0.75	-0.2
3,812,138	+	guaD	OKFHMN_19625	0.75	+0.4
3,812,152	-	guaD	OKFHMN_19625	0.76	-2.4
3,812,196	-	guaD	OKFHMN_19625	0.79	-0.3
3,812,229	+	guaD	OKFHMN_19625	0.81	-0.7
3,812,229	+	guaD	OKFHMN_19625	0.81	+1.5
3,812,230	-	guaD	OKFHMN_19625	0.82	+0.2
3,812,230	-	guaD	OKFHMN_19625	0.82	+0.6
3,812,230	-	guaD	OKFHMN_19625	0.82	+0.3
3,812,235	+	guaD	OKFHMN_19625	0.82	+1.1
3,812,251	+	guaD	OKFHMN_19625	0.83	+0.3
3,812,252	-	guaD	OKFHMN_19625	0.83	-1.6
3,812,255	-	guaD	OKFHMN_19625	0.83	+0.1
3,812,286	+	guaD	OKFHMN_19625	0.86	+1.4
3,812,350	-				+0.8
3,812,359	+				-0.0
3,812,431	-				+0.4
3,812,453	-				+0.0
3,812,485	+				+0.2
3,812,513	+				-2.3
3,812,516	+				+0.0
3,812,517	-				-0.4
3,812,517	-				-1.0
3,812,580	+				+0.4
3,812,610	+				-0.5
3,812,610	+				+2.1
3,812,617	+				+0.7
3,812,617	+				+0.9
3,812,618	-				+0.9
3,812,618	-				-0.1
3,812,656	+	xanQ	OKFHMN_19630	0.12	+0.2
3,812,679	+	xanQ	OKFHMN_19630	0.13	-0.5
3,812,680	-	xanQ	OKFHMN_19630	0.14	-2.4
3,812,697	-	xanQ	OKFHMN_19630	0.15	+0.3
3,812,697	-	xanQ	OKFHMN_19630	0.15	+0.2
3,812,697	-	xanQ	OKFHMN_19630	0.15	-0.1
3,812,697	-	xanQ	OKFHMN_19630	0.15	-0.0
3,812,915	+	xanQ	OKFHMN_19630	0.30	-0.6
3,813,134	+	xanQ	OKFHMN_19630	0.46	-0.5
3,813,142	+	xanQ	OKFHMN_19630	0.47	-1.7
3,813,186	-	xanQ	OKFHMN_19630	0.50	+0.5
3,813,224	+	xanQ	OKFHMN_19630	0.52	+0.3
3,813,225	-	xanQ	OKFHMN_19630	0.52	+0.5
3,813,227	-	xanQ	OKFHMN_19630	0.53	+0.6
3,813,390	-	xanQ	OKFHMN_19630	0.64	+1.0
3,813,411	+	xanQ	OKFHMN_19630	0.66	+0.3
3,813,412	-	xanQ	OKFHMN_19630	0.66	+1.3
3,813,412	-	xanQ	OKFHMN_19630	0.66	+0.2
3,813,426	+	xanQ	OKFHMN_19630	0.67	-2.6
3,813,446	+	xanQ	OKFHMN_19630	0.68	-0.5
3,813,447	-	xanQ	OKFHMN_19630	0.68	+0.5
3,813,466	-	xanQ	OKFHMN_19630	0.70	+0.3