Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhiM and OKFHMN_16455 are separated by 383 nucleotides OKFHMN_16455 and yhiJ are separated by 261 nucleotides
OKFHMN_16450: yhiM - Inner membrane protein YhiM, at 3,204,709 to 3,205,761
yhiM
OKFHMN_16455: OKFHMN_16455 - DUF4049 domain-containing protein, at 3,206,145 to 3,207,755
_16455
OKFHMN_16460: yhiJ - Uncharacterized protein YhiJ, at 3,208,017 to 3,209,639
yhiJ
Position (kb)
3206
3207
3208 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3205.154 kb on - strand, within yhiM at 3205.187 kb on - strand, within yhiM at 3205.202 kb on + strand, within yhiM at 3205.214 kb on - strand, within yhiM at 3205.229 kb on - strand, within yhiM at 3205.236 kb on + strand, within yhiM at 3205.236 kb on + strand, within yhiM at 3205.239 kb on + strand, within yhiM at 3205.400 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.470 kb on + strand, within yhiM at 3205.506 kb on + strand, within yhiM at 3205.521 kb on - strand, within yhiM at 3205.588 kb on - strand, within yhiM at 3205.615 kb on + strand, within yhiM at 3205.717 kb on - strand at 3205.754 kb on - strand at 3205.866 kb on - strand at 3205.927 kb on + strand at 3206.299 kb on + strand at 3206.300 kb on - strand at 3206.321 kb on + strand, within OKFHMN_16455 at 3206.418 kb on - strand, within OKFHMN_16455 at 3206.821 kb on + strand, within OKFHMN_16455 at 3207.551 kb on + strand, within OKFHMN_16455 at 3207.603 kb on - strand at 3207.834 kb on + strand at 3207.835 kb on - strand at 3208.136 kb on + strand at 3208.148 kb on + strand at 3208.148 kb on + strand at 3208.150 kb on + strand at 3208.417 kb on + strand, within yhiJ at 3208.428 kb on - strand, within yhiJ at 3208.507 kb on - strand, within yhiJ at 3208.615 kb on - strand, within yhiJ at 3208.726 kb on + strand, within yhiJ at 3208.727 kb on - strand, within yhiJ
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,205,154 - yhiM OKFHMN_16450 0.42 -0.0 3,205,187 - yhiM OKFHMN_16450 0.45 +0.7 3,205,202 + yhiM OKFHMN_16450 0.47 +0.1 3,205,214 - yhiM OKFHMN_16450 0.48 +0.6 3,205,229 - yhiM OKFHMN_16450 0.49 +0.9 3,205,236 + yhiM OKFHMN_16450 0.50 +0.8 3,205,236 + yhiM OKFHMN_16450 0.50 +0.4 3,205,239 + yhiM OKFHMN_16450 0.50 +0.3 3,205,400 - yhiM OKFHMN_16450 0.66 +0.8 3,205,417 - yhiM OKFHMN_16450 0.67 -0.0 3,205,417 - yhiM OKFHMN_16450 0.67 +1.4 3,205,417 - yhiM OKFHMN_16450 0.67 +0.2 3,205,470 + yhiM OKFHMN_16450 0.72 -0.5 3,205,506 + yhiM OKFHMN_16450 0.76 +0.3 3,205,521 - yhiM OKFHMN_16450 0.77 +0.6 3,205,588 - yhiM OKFHMN_16450 0.83 -3.1 3,205,615 + yhiM OKFHMN_16450 0.86 +0.2 3,205,717 - -0.0 3,205,754 - -0.0 3,205,866 - -0.4 3,205,927 + +0.5 3,206,299 + -0.9 3,206,300 - +1.6 3,206,321 + OKFHMN_16455 0.11 -0.7 3,206,418 - OKFHMN_16455 0.17 +0.3 3,206,821 + OKFHMN_16455 0.42 +0.5 3,207,551 + OKFHMN_16455 0.87 +0.5 3,207,603 - +1.1 3,207,834 + +0.7 3,207,835 - -0.5 3,208,136 + +0.9 3,208,148 + +0.1 3,208,148 + +1.9 3,208,150 + -0.5 3,208,417 + yhiJ OKFHMN_16460 0.25 +0.1 3,208,428 - yhiJ OKFHMN_16460 0.25 -0.5 3,208,507 - yhiJ OKFHMN_16460 0.30 +1.4 3,208,615 - yhiJ OKFHMN_16460 0.37 -0.5 3,208,726 + yhiJ OKFHMN_16460 0.44 -0.0 3,208,727 - yhiJ OKFHMN_16460 0.44 +0.3
Or see this region's nucleotide sequence