Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhiN and yhiM are separated by 318 nucleotides yhiM and OKFHMN_16455 are separated by 383 nucleotides
OKFHMN_16445: yhiN - Uncharacterized protein YhiN, at 3,203,188 to 3,204,390
yhiN
OKFHMN_16450: yhiM - Inner membrane protein YhiM, at 3,204,709 to 3,205,761
yhiM
OKFHMN_16455: OKFHMN_16455 - DUF4049 domain-containing protein, at 3,206,145 to 3,207,755
_16455
Position (kb)
3204
3205
3206 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3203.709 kb on + strand, within yhiN at 3203.710 kb on - strand, within yhiN at 3203.779 kb on - strand, within yhiN at 3203.798 kb on + strand, within yhiN at 3203.798 kb on + strand, within yhiN at 3203.871 kb on - strand, within yhiN at 3203.871 kb on - strand, within yhiN at 3203.923 kb on + strand, within yhiN at 3203.924 kb on - strand, within yhiN at 3203.949 kb on + strand, within yhiN at 3203.949 kb on + strand, within yhiN at 3204.072 kb on - strand, within yhiN at 3204.141 kb on + strand, within yhiN at 3204.165 kb on - strand, within yhiN at 3204.165 kb on - strand, within yhiN at 3204.274 kb on + strand at 3204.279 kb on + strand at 3204.441 kb on - strand at 3204.456 kb on + strand at 3204.457 kb on - strand at 3204.468 kb on - strand at 3204.505 kb on + strand at 3204.506 kb on - strand at 3204.509 kb on - strand at 3204.511 kb on - strand at 3204.511 kb on - strand at 3204.610 kb on - strand at 3204.648 kb on + strand at 3204.733 kb on + strand at 3204.733 kb on + strand at 3204.760 kb on - strand at 3204.760 kb on - strand at 3204.806 kb on + strand at 3204.807 kb on - strand at 3204.847 kb on + strand, within yhiM at 3204.889 kb on + strand, within yhiM at 3204.912 kb on + strand, within yhiM at 3204.912 kb on + strand, within yhiM at 3204.913 kb on - strand, within yhiM at 3204.952 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.034 kb on + strand, within yhiM at 3205.035 kb on - strand, within yhiM at 3205.035 kb on - strand, within yhiM at 3205.035 kb on - strand, within yhiM at 3205.113 kb on + strand, within yhiM at 3205.116 kb on + strand, within yhiM at 3205.117 kb on - strand, within yhiM at 3205.154 kb on - strand, within yhiM at 3205.187 kb on - strand, within yhiM at 3205.202 kb on + strand, within yhiM at 3205.214 kb on - strand, within yhiM at 3205.229 kb on - strand, within yhiM at 3205.236 kb on + strand, within yhiM at 3205.236 kb on + strand, within yhiM at 3205.239 kb on + strand, within yhiM at 3205.400 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.417 kb on - strand, within yhiM at 3205.470 kb on + strand, within yhiM at 3205.506 kb on + strand, within yhiM at 3205.521 kb on - strand, within yhiM at 3205.588 kb on - strand, within yhiM at 3205.615 kb on + strand, within yhiM at 3205.717 kb on - strand at 3205.754 kb on - strand at 3205.866 kb on - strand at 3205.927 kb on + strand at 3206.299 kb on + strand at 3206.300 kb on - strand at 3206.321 kb on + strand, within OKFHMN_16455 at 3206.418 kb on - strand, within OKFHMN_16455
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,203,709 + yhiN OKFHMN_16445 0.43 +1.5 3,203,710 - yhiN OKFHMN_16445 0.43 -2.7 3,203,779 - yhiN OKFHMN_16445 0.49 +0.4 3,203,798 + yhiN OKFHMN_16445 0.51 +0.3 3,203,798 + yhiN OKFHMN_16445 0.51 -0.1 3,203,871 - yhiN OKFHMN_16445 0.57 +1.1 3,203,871 - yhiN OKFHMN_16445 0.57 -0.4 3,203,923 + yhiN OKFHMN_16445 0.61 +1.0 3,203,924 - yhiN OKFHMN_16445 0.61 +2.5 3,203,949 + yhiN OKFHMN_16445 0.63 -0.8 3,203,949 + yhiN OKFHMN_16445 0.63 -3.1 3,204,072 - yhiN OKFHMN_16445 0.73 -0.6 3,204,141 + yhiN OKFHMN_16445 0.79 -0.3 3,204,165 - yhiN OKFHMN_16445 0.81 -0.0 3,204,165 - yhiN OKFHMN_16445 0.81 -0.0 3,204,274 + +0.2 3,204,279 + -0.1 3,204,441 - -0.1 3,204,456 + -0.6 3,204,457 - -0.4 3,204,468 - -1.3 3,204,505 + +0.0 3,204,506 - +0.1 3,204,509 - +1.6 3,204,511 - -1.4 3,204,511 - +0.1 3,204,610 - -0.0 3,204,648 + +0.5 3,204,733 + +0.4 3,204,733 + +0.2 3,204,760 - +0.5 3,204,760 - +0.3 3,204,806 + -0.4 3,204,807 - +0.6 3,204,847 + yhiM OKFHMN_16450 0.13 -0.8 3,204,889 + yhiM OKFHMN_16450 0.17 +0.5 3,204,912 + yhiM OKFHMN_16450 0.19 -1.2 3,204,912 + yhiM OKFHMN_16450 0.19 +0.3 3,204,913 - yhiM OKFHMN_16450 0.19 +0.9 3,204,952 + yhiM OKFHMN_16450 0.23 -0.0 3,205,034 + yhiM OKFHMN_16450 0.31 +0.0 3,205,034 + yhiM OKFHMN_16450 0.31 +0.3 3,205,034 + yhiM OKFHMN_16450 0.31 +0.3 3,205,034 + yhiM OKFHMN_16450 0.31 -0.4 3,205,034 + yhiM OKFHMN_16450 0.31 +0.9 3,205,034 + yhiM OKFHMN_16450 0.31 +0.3 3,205,034 + yhiM OKFHMN_16450 0.31 -0.0 3,205,035 - yhiM OKFHMN_16450 0.31 -1.1 3,205,035 - yhiM OKFHMN_16450 0.31 +0.5 3,205,035 - yhiM OKFHMN_16450 0.31 -0.8 3,205,113 + yhiM OKFHMN_16450 0.38 -0.2 3,205,116 + yhiM OKFHMN_16450 0.39 +0.3 3,205,117 - yhiM OKFHMN_16450 0.39 +0.5 3,205,154 - yhiM OKFHMN_16450 0.42 -0.0 3,205,187 - yhiM OKFHMN_16450 0.45 +0.7 3,205,202 + yhiM OKFHMN_16450 0.47 +0.1 3,205,214 - yhiM OKFHMN_16450 0.48 +0.6 3,205,229 - yhiM OKFHMN_16450 0.49 +0.9 3,205,236 + yhiM OKFHMN_16450 0.50 +0.8 3,205,236 + yhiM OKFHMN_16450 0.50 +0.4 3,205,239 + yhiM OKFHMN_16450 0.50 +0.3 3,205,400 - yhiM OKFHMN_16450 0.66 +0.8 3,205,417 - yhiM OKFHMN_16450 0.67 -0.0 3,205,417 - yhiM OKFHMN_16450 0.67 +1.4 3,205,417 - yhiM OKFHMN_16450 0.67 +0.2 3,205,470 + yhiM OKFHMN_16450 0.72 -0.5 3,205,506 + yhiM OKFHMN_16450 0.76 +0.3 3,205,521 - yhiM OKFHMN_16450 0.77 +0.6 3,205,588 - yhiM OKFHMN_16450 0.83 -3.1 3,205,615 + yhiM OKFHMN_16450 0.86 +0.2 3,205,717 - -0.0 3,205,754 - -0.0 3,205,866 - -0.4 3,205,927 + +0.5 3,206,299 + -0.9 3,206,300 - +1.6 3,206,321 + OKFHMN_16455 0.11 -0.7 3,206,418 - OKFHMN_16455 0.17 +0.3
Or see this region's nucleotide sequence