Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKFHMN_15205 and OKFHMN_15210 overlap by 28 nucleotides OKFHMN_15210 and yicN are separated by 52 nucleotides yicN and yiaG are separated by 115 nucleotides yiaG and OKFHMN_15225 overlap by 17 nucleotides
OKFHMN_15205: OKFHMN_15205 - Permease family, at 2,944,158 to 2,945,153
_15205
OKFHMN_15210: OKFHMN_15210 - NCS2 family permease, at 2,945,126 to 2,945,491
_15210
OKFHMN_15215: yicN - Uncharacterized protein YicN, at 2,945,544 to 2,945,996
yicN
OKFHMN_15220: yiaG - transcriptional regulator, at 2,946,112 to 2,946,435
yiaG
OKFHMN_15225: OKFHMN_15225 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,946,419 to 2,946,772
_15225
Position (kb)
2945
2946 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2944.222 kb on + strand at 2944.291 kb on - strand, within OKFHMN_15205 at 2944.386 kb on - strand, within OKFHMN_15205 at 2944.399 kb on + strand, within OKFHMN_15205 at 2944.400 kb on - strand, within OKFHMN_15205 at 2944.400 kb on - strand, within OKFHMN_15205 at 2944.400 kb on - strand, within OKFHMN_15205 at 2944.406 kb on + strand, within OKFHMN_15205 at 2944.407 kb on - strand, within OKFHMN_15205 at 2944.411 kb on + strand, within OKFHMN_15205 at 2944.481 kb on + strand, within OKFHMN_15205 at 2944.481 kb on + strand, within OKFHMN_15205 at 2944.482 kb on - strand, within OKFHMN_15205 at 2944.482 kb on - strand, within OKFHMN_15205 at 2944.940 kb on + strand, within OKFHMN_15205 at 2944.975 kb on + strand, within OKFHMN_15205 at 2945.005 kb on + strand, within OKFHMN_15205 at 2945.012 kb on + strand, within OKFHMN_15205 at 2945.047 kb on - strand, within OKFHMN_15205 at 2945.060 kb on - strand at 2945.060 kb on - strand at 2945.107 kb on + strand at 2945.116 kb on + strand at 2945.188 kb on + strand, within OKFHMN_15210 at 2945.189 kb on - strand, within OKFHMN_15210 at 2945.226 kb on - strand, within OKFHMN_15210 at 2945.477 kb on - strand at 2945.490 kb on - strand at 2945.513 kb on + strand at 2945.663 kb on - strand, within yicN at 2945.663 kb on - strand, within yicN at 2945.837 kb on - strand, within yicN at 2945.865 kb on - strand, within yicN at 2945.949 kb on + strand, within yicN at 2945.950 kb on - strand, within yicN at 2945.951 kb on + strand at 2946.019 kb on - strand at 2946.038 kb on + strand at 2946.086 kb on - strand at 2946.086 kb on - strand at 2946.098 kb on + strand at 2946.098 kb on + strand at 2946.098 kb on + strand at 2946.099 kb on - strand at 2946.099 kb on - strand at 2946.109 kb on + strand at 2946.295 kb on + strand, within yiaG at 2946.295 kb on + strand, within yiaG at 2946.296 kb on - strand, within yiaG at 2946.296 kb on - strand, within yiaG at 2946.334 kb on - strand, within yiaG at 2946.354 kb on + strand, within yiaG at 2946.355 kb on - strand, within yiaG at 2946.414 kb on + strand at 2946.436 kb on - strand at 2946.436 kb on - strand at 2946.477 kb on - strand, within OKFHMN_15225
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,944,222 + -0.2 2,944,291 - OKFHMN_15205 0.13 +0.4 2,944,386 - OKFHMN_15205 0.23 +0.5 2,944,399 + OKFHMN_15205 0.24 -0.1 2,944,400 - OKFHMN_15205 0.24 +0.2 2,944,400 - OKFHMN_15205 0.24 -0.1 2,944,400 - OKFHMN_15205 0.24 +0.3 2,944,406 + OKFHMN_15205 0.25 +0.5 2,944,407 - OKFHMN_15205 0.25 -1.0 2,944,411 + OKFHMN_15205 0.25 +0.1 2,944,481 + OKFHMN_15205 0.32 +0.5 2,944,481 + OKFHMN_15205 0.32 -0.3 2,944,482 - OKFHMN_15205 0.33 -0.8 2,944,482 - OKFHMN_15205 0.33 +1.8 2,944,940 + OKFHMN_15205 0.79 -0.2 2,944,975 + OKFHMN_15205 0.82 +0.7 2,945,005 + OKFHMN_15205 0.85 -1.0 2,945,012 + OKFHMN_15205 0.86 -1.9 2,945,047 - OKFHMN_15205 0.89 -0.5 2,945,060 - +0.5 2,945,060 - -0.0 2,945,107 + +0.2 2,945,116 + -0.4 2,945,188 + OKFHMN_15210 0.17 -0.1 2,945,189 - OKFHMN_15210 0.17 -0.2 2,945,226 - OKFHMN_15210 0.27 -0.5 2,945,477 - +0.5 2,945,490 - +1.2 2,945,513 + -0.3 2,945,663 - yicN OKFHMN_15215 0.26 -0.1 2,945,663 - yicN OKFHMN_15215 0.26 +0.4 2,945,837 - yicN OKFHMN_15215 0.65 -0.0 2,945,865 - yicN OKFHMN_15215 0.71 +1.9 2,945,949 + yicN OKFHMN_15215 0.89 +0.6 2,945,950 - yicN OKFHMN_15215 0.90 -0.7 2,945,951 + -0.4 2,946,019 - -0.8 2,946,038 + +0.2 2,946,086 - +0.6 2,946,086 - -0.3 2,946,098 + -1.0 2,946,098 + +1.3 2,946,098 + -0.3 2,946,099 - +0.4 2,946,099 - +0.9 2,946,109 + -0.4 2,946,295 + yiaG OKFHMN_15220 0.56 +0.5 2,946,295 + yiaG OKFHMN_15220 0.56 +0.5 2,946,296 - yiaG OKFHMN_15220 0.57 +0.9 2,946,296 - yiaG OKFHMN_15220 0.57 +0.0 2,946,334 - yiaG OKFHMN_15220 0.69 +1.0 2,946,354 + yiaG OKFHMN_15220 0.75 -0.4 2,946,355 - yiaG OKFHMN_15220 0.75 -0.8 2,946,414 + -0.5 2,946,436 - +0.5 2,946,436 - -0.5 2,946,477 - OKFHMN_15225 0.16 +0.5
Or see this region's nucleotide sequence