Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt btsT and yjiX are separated by 49 nucleotides yjiX and yjiA are separated by 10 nucleotides yjiA and OKFHMN_11400 are separated by 68 nucleotides
OKFHMN_11385: btsT - pyruvate/proton symporter BtsT, at 2,152,680 to 2,154,830
btsT
OKFHMN_11390: yjiX - Uncharacterized protein YjiX, at 2,154,880 to 2,155,083
yjiX
OKFHMN_11395: yjiA - GTPase, at 2,155,094 to 2,156,050
yjiA
OKFHMN_11400: OKFHMN_11400 - DUF262 domain-containing protein, at 2,156,119 to 2,157,477
_11400
Position (kb)
2155
2156
2157 Strain fitness (log2 ratio)
-1
0
1 at 2154.096 kb on - strand, within btsT at 2154.222 kb on - strand, within btsT at 2154.288 kb on - strand, within btsT at 2154.325 kb on - strand, within btsT at 2154.333 kb on + strand, within btsT at 2154.446 kb on + strand, within btsT at 2154.466 kb on - strand, within btsT at 2154.493 kb on + strand, within btsT at 2154.493 kb on + strand, within btsT at 2154.494 kb on - strand, within btsT at 2154.494 kb on - strand, within btsT at 2154.494 kb on - strand, within btsT at 2154.571 kb on - strand, within btsT at 2154.571 kb on - strand, within btsT at 2154.571 kb on - strand, within btsT at 2154.663 kb on + strand at 2154.664 kb on - strand at 2154.705 kb on + strand at 2154.706 kb on - strand at 2154.745 kb on + strand at 2154.745 kb on + strand at 2154.750 kb on - strand at 2154.764 kb on + strand at 2154.783 kb on + strand at 2154.783 kb on + strand at 2154.784 kb on - strand at 2154.828 kb on + strand at 2154.879 kb on + strand at 2154.879 kb on + strand at 2154.879 kb on + strand at 2154.880 kb on - strand at 2154.880 kb on - strand at 2154.880 kb on - strand at 2154.880 kb on - strand at 2154.893 kb on + strand at 2154.893 kb on + strand at 2154.894 kb on - strand at 2154.894 kb on - strand at 2154.894 kb on - strand at 2154.961 kb on + strand, within yjiX at 2154.961 kb on + strand, within yjiX at 2154.961 kb on + strand, within yjiX at 2154.962 kb on - strand, within yjiX at 2154.962 kb on - strand, within yjiX at 2154.972 kb on + strand, within yjiX at 2154.973 kb on - strand, within yjiX at 2155.001 kb on - strand, within yjiX at 2155.001 kb on - strand, within yjiX at 2155.010 kb on - strand, within yjiX at 2155.010 kb on - strand, within yjiX at 2155.059 kb on + strand, within yjiX at 2155.163 kb on - strand at 2155.184 kb on + strand at 2155.323 kb on + strand, within yjiA at 2155.357 kb on + strand, within yjiA at 2155.491 kb on + strand, within yjiA at 2155.491 kb on + strand, within yjiA at 2155.640 kb on + strand, within yjiA at 2155.696 kb on + strand, within yjiA at 2155.797 kb on + strand, within yjiA at 2155.802 kb on - strand, within yjiA at 2155.976 kb on - strand at 2156.111 kb on + strand at 2156.115 kb on + strand at 2156.115 kb on + strand at 2156.116 kb on - strand at 2156.345 kb on + strand, within OKFHMN_11400 at 2156.371 kb on - strand, within OKFHMN_11400 at 2156.495 kb on - strand, within OKFHMN_11400 at 2156.614 kb on - strand, within OKFHMN_11400 at 2156.691 kb on - strand, within OKFHMN_11400 at 2156.914 kb on - strand, within OKFHMN_11400 at 2156.972 kb on - strand, within OKFHMN_11400 at 2157.025 kb on - strand, within OKFHMN_11400
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,154,096 - btsT OKFHMN_11385 0.66 -0.4 2,154,222 - btsT OKFHMN_11385 0.72 +0.1 2,154,288 - btsT OKFHMN_11385 0.75 +0.7 2,154,325 - btsT OKFHMN_11385 0.76 -0.6 2,154,333 + btsT OKFHMN_11385 0.77 -0.0 2,154,446 + btsT OKFHMN_11385 0.82 +1.2 2,154,466 - btsT OKFHMN_11385 0.83 +1.0 2,154,493 + btsT OKFHMN_11385 0.84 -0.7 2,154,493 + btsT OKFHMN_11385 0.84 +0.6 2,154,494 - btsT OKFHMN_11385 0.84 -0.9 2,154,494 - btsT OKFHMN_11385 0.84 +0.0 2,154,494 - btsT OKFHMN_11385 0.84 -0.0 2,154,571 - btsT OKFHMN_11385 0.88 +0.0 2,154,571 - btsT OKFHMN_11385 0.88 -0.5 2,154,571 - btsT OKFHMN_11385 0.88 +0.3 2,154,663 + -0.2 2,154,664 - +0.0 2,154,705 + -0.8 2,154,706 - -0.6 2,154,745 + -0.9 2,154,745 + +0.4 2,154,750 - -1.5 2,154,764 + -0.1 2,154,783 + +0.6 2,154,783 + +1.2 2,154,784 - +0.6 2,154,828 + +0.2 2,154,879 + +0.2 2,154,879 + +0.7 2,154,879 + -0.1 2,154,880 - -0.3 2,154,880 - -0.1 2,154,880 - +0.7 2,154,880 - -0.5 2,154,893 + +0.7 2,154,893 + +0.6 2,154,894 - +0.5 2,154,894 - -0.0 2,154,894 - +0.0 2,154,961 + yjiX OKFHMN_11390 0.40 -1.1 2,154,961 + yjiX OKFHMN_11390 0.40 +0.8 2,154,961 + yjiX OKFHMN_11390 0.40 +1.1 2,154,962 - yjiX OKFHMN_11390 0.40 -0.8 2,154,962 - yjiX OKFHMN_11390 0.40 +1.0 2,154,972 + yjiX OKFHMN_11390 0.45 +0.1 2,154,973 - yjiX OKFHMN_11390 0.46 -1.0 2,155,001 - yjiX OKFHMN_11390 0.59 +0.9 2,155,001 - yjiX OKFHMN_11390 0.59 -0.7 2,155,010 - yjiX OKFHMN_11390 0.64 +0.5 2,155,010 - yjiX OKFHMN_11390 0.64 +0.8 2,155,059 + yjiX OKFHMN_11390 0.88 -0.5 2,155,163 - -1.7 2,155,184 + -0.7 2,155,323 + yjiA OKFHMN_11395 0.24 +0.2 2,155,357 + yjiA OKFHMN_11395 0.27 -0.2 2,155,491 + yjiA OKFHMN_11395 0.41 +0.5 2,155,491 + yjiA OKFHMN_11395 0.41 -0.1 2,155,640 + yjiA OKFHMN_11395 0.57 -0.4 2,155,696 + yjiA OKFHMN_11395 0.63 -0.3 2,155,797 + yjiA OKFHMN_11395 0.73 +0.0 2,155,802 - yjiA OKFHMN_11395 0.74 -0.1 2,155,976 - -0.2 2,156,111 + -0.1 2,156,115 + +0.4 2,156,115 + -0.2 2,156,116 - +1.1 2,156,345 + OKFHMN_11400 0.17 +0.7 2,156,371 - OKFHMN_11400 0.19 +0.7 2,156,495 - OKFHMN_11400 0.28 -0.7 2,156,614 - OKFHMN_11400 0.36 +0.0 2,156,691 - OKFHMN_11400 0.42 +0.8 2,156,914 - OKFHMN_11400 0.58 -0.4 2,156,972 - OKFHMN_11400 0.63 -0.0 2,157,025 - OKFHMN_11400 0.67 +0.7
Or see this region's nucleotide sequence