Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt msyB and satP are separated by 148 nucleotides satP and mog are separated by 34 nucleotides mog and OKFHMN_11080 are separated by 114 nucleotides
OKFHMN_11065: msyB - acidic protein MsyB, at 2,091,799 to 2,092,512
msyB
OKFHMN_11070: satP - acetate uptake transporter, at 2,092,661 to 2,093,227
satP
OKFHMN_11075: mog - molybdopterin adenylyltransferase, at 2,093,262 to 2,093,849
mog
OKFHMN_11080: OKFHMN_11080 - transaldolase B, at 2,093,964 to 2,094,917
_11080
Position (kb)
2093
2094 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2092.277 kb on + strand, within msyB at 2092.352 kb on + strand, within msyB at 2092.513 kb on + strand at 2092.580 kb on + strand at 2092.583 kb on + strand at 2092.584 kb on - strand at 2092.611 kb on - strand at 2092.661 kb on - strand at 2092.672 kb on + strand at 2092.672 kb on + strand at 2092.673 kb on - strand at 2092.746 kb on + strand, within satP at 2092.746 kb on + strand, within satP at 2092.746 kb on + strand, within satP at 2092.746 kb on + strand, within satP at 2092.747 kb on - strand, within satP at 2092.747 kb on - strand, within satP at 2092.772 kb on - strand, within satP at 2092.858 kb on - strand, within satP at 2092.858 kb on - strand, within satP at 2092.874 kb on + strand, within satP at 2092.874 kb on + strand, within satP at 2092.875 kb on - strand, within satP at 2092.965 kb on - strand, within satP at 2092.983 kb on + strand, within satP at 2092.984 kb on - strand, within satP at 2092.984 kb on - strand, within satP at 2092.984 kb on - strand, within satP at 2092.987 kb on + strand, within satP at 2092.988 kb on - strand, within satP at 2092.988 kb on - strand, within satP at 2093.156 kb on + strand, within satP at 2093.156 kb on + strand, within satP at 2093.332 kb on + strand, within mog at 2093.332 kb on + strand, within mog at 2093.332 kb on + strand, within mog at 2093.332 kb on + strand, within mog at 2093.333 kb on - strand, within mog at 2093.365 kb on - strand, within mog at 2093.432 kb on + strand, within mog at 2093.433 kb on - strand, within mog at 2093.460 kb on - strand, within mog at 2093.601 kb on + strand, within mog at 2093.712 kb on + strand, within mog at 2093.826 kb on + strand at 2093.839 kb on - strand at 2093.839 kb on - strand at 2093.839 kb on - strand at 2093.844 kb on - strand at 2093.866 kb on - strand at 2093.890 kb on + strand at 2093.929 kb on + strand at 2093.930 kb on - strand at 2093.965 kb on + strand at 2093.965 kb on + strand at 2093.966 kb on - strand at 2094.018 kb on - strand at 2094.038 kb on + strand at 2094.043 kb on - strand at 2094.043 kb on - strand at 2094.043 kb on - strand at 2094.093 kb on - strand, within OKFHMN_11080 at 2094.124 kb on + strand, within OKFHMN_11080 at 2094.134 kb on + strand, within OKFHMN_11080 at 2094.135 kb on - strand, within OKFHMN_11080 at 2094.281 kb on - strand, within OKFHMN_11080 at 2094.512 kb on + strand, within OKFHMN_11080 at 2094.533 kb on + strand, within OKFHMN_11080 at 2094.534 kb on - strand, within OKFHMN_11080 at 2094.545 kb on + strand, within OKFHMN_11080 at 2094.546 kb on - strand, within OKFHMN_11080 at 2094.548 kb on + strand, within OKFHMN_11080 at 2094.548 kb on + strand, within OKFHMN_11080 at 2094.610 kb on + strand, within OKFHMN_11080 at 2094.611 kb on - strand, within OKFHMN_11080 at 2094.682 kb on - strand, within OKFHMN_11080 at 2094.770 kb on + strand, within OKFHMN_11080 at 2094.770 kb on + strand, within OKFHMN_11080 at 2094.771 kb on - strand, within OKFHMN_11080 at 2094.771 kb on - strand, within OKFHMN_11080 at 2094.776 kb on - strand, within OKFHMN_11080
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,092,277 + msyB OKFHMN_11065 0.67 +0.4 2,092,352 + msyB OKFHMN_11065 0.77 +0.8 2,092,513 + -0.5 2,092,580 + +1.5 2,092,583 + +0.1 2,092,584 - +0.2 2,092,611 - +0.7 2,092,661 - +0.4 2,092,672 + +0.5 2,092,672 + -0.1 2,092,673 - -0.1 2,092,746 + satP OKFHMN_11070 0.15 -0.7 2,092,746 + satP OKFHMN_11070 0.15 -0.1 2,092,746 + satP OKFHMN_11070 0.15 -0.3 2,092,746 + satP OKFHMN_11070 0.15 +0.2 2,092,747 - satP OKFHMN_11070 0.15 +2.1 2,092,747 - satP OKFHMN_11070 0.15 -0.1 2,092,772 - satP OKFHMN_11070 0.20 +0.2 2,092,858 - satP OKFHMN_11070 0.35 +0.7 2,092,858 - satP OKFHMN_11070 0.35 +0.8 2,092,874 + satP OKFHMN_11070 0.38 -0.4 2,092,874 + satP OKFHMN_11070 0.38 +0.5 2,092,875 - satP OKFHMN_11070 0.38 -0.6 2,092,965 - satP OKFHMN_11070 0.54 -0.3 2,092,983 + satP OKFHMN_11070 0.57 +0.7 2,092,984 - satP OKFHMN_11070 0.57 -0.4 2,092,984 - satP OKFHMN_11070 0.57 +0.3 2,092,984 - satP OKFHMN_11070 0.57 +0.0 2,092,987 + satP OKFHMN_11070 0.57 -0.1 2,092,988 - satP OKFHMN_11070 0.58 +0.2 2,092,988 - satP OKFHMN_11070 0.58 +0.3 2,093,156 + satP OKFHMN_11070 0.87 +0.5 2,093,156 + satP OKFHMN_11070 0.87 +0.1 2,093,332 + mog OKFHMN_11075 0.12 -0.4 2,093,332 + mog OKFHMN_11075 0.12 +0.3 2,093,332 + mog OKFHMN_11075 0.12 +2.0 2,093,332 + mog OKFHMN_11075 0.12 -0.4 2,093,333 - mog OKFHMN_11075 0.12 -0.9 2,093,365 - mog OKFHMN_11075 0.18 +0.9 2,093,432 + mog OKFHMN_11075 0.29 -0.1 2,093,433 - mog OKFHMN_11075 0.29 +0.2 2,093,460 - mog OKFHMN_11075 0.34 +1.6 2,093,601 + mog OKFHMN_11075 0.58 -0.6 2,093,712 + mog OKFHMN_11075 0.77 -0.9 2,093,826 + +0.3 2,093,839 - +0.0 2,093,839 - +0.4 2,093,839 - -0.1 2,093,844 - -0.2 2,093,866 - -0.4 2,093,890 + -0.5 2,093,929 + -0.6 2,093,930 - +1.1 2,093,965 + -0.2 2,093,965 + +0.2 2,093,966 - -0.5 2,094,018 - -1.0 2,094,038 + +0.9 2,094,043 - -0.7 2,094,043 - -0.1 2,094,043 - -1.9 2,094,093 - OKFHMN_11080 0.14 -0.3 2,094,124 + OKFHMN_11080 0.17 -0.5 2,094,134 + OKFHMN_11080 0.18 -0.1 2,094,135 - OKFHMN_11080 0.18 +0.4 2,094,281 - OKFHMN_11080 0.33 +1.2 2,094,512 + OKFHMN_11080 0.57 -1.2 2,094,533 + OKFHMN_11080 0.60 -0.1 2,094,534 - OKFHMN_11080 0.60 -0.2 2,094,545 + OKFHMN_11080 0.61 -0.7 2,094,546 - OKFHMN_11080 0.61 -0.3 2,094,548 + OKFHMN_11080 0.61 -0.3 2,094,548 + OKFHMN_11080 0.61 -0.7 2,094,610 + OKFHMN_11080 0.68 -0.5 2,094,611 - OKFHMN_11080 0.68 +0.1 2,094,682 - OKFHMN_11080 0.75 -0.5 2,094,770 + OKFHMN_11080 0.84 -0.7 2,094,770 + OKFHMN_11080 0.84 +0.1 2,094,771 - OKFHMN_11080 0.85 -2.5 2,094,771 - OKFHMN_11080 0.85 +0.3 2,094,776 - OKFHMN_11080 0.85 -0.1
Or see this region's nucleotide sequence