Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hscC and OKFHMN_07285 are separated by 59 nucleotides OKFHMN_07285 and djlC are separated by 162 nucleotides djlC and ybeU overlap by 4 nucleotides
OKFHMN_07280: hscC - molecular chaperone HscC, at 1,308,550 to 1,310,220
hscC
OKFHMN_07285: OKFHMN_07285 - Hsc56 co-chaperone of HscC, at 1,310,280 to 1,311,116
_07285
OKFHMN_07290: djlC - Uncharacterized J domain-containing protein DjlC, at 1,311,279 to 1,311,731
djlC
OKFHMN_07295: ybeU - Uncharacterized protein YbeU, at 1,311,728 to 1,312,435
ybeU
Position (kb)
1310
1311
1312 Strain fitness (log2 ratio)
-2
-1
0
1 at 1309.292 kb on + strand, within hscC at 1309.292 kb on + strand, within hscC at 1309.293 kb on - strand, within hscC at 1309.587 kb on - strand, within hscC at 1309.623 kb on + strand, within hscC at 1309.653 kb on + strand, within hscC at 1309.762 kb on - strand, within hscC at 1309.878 kb on + strand, within hscC at 1310.034 kb on + strand, within hscC at 1310.198 kb on - strand at 1310.201 kb on + strand at 1310.201 kb on + strand at 1310.475 kb on - strand, within OKFHMN_07285 at 1310.517 kb on - strand, within OKFHMN_07285 at 1310.520 kb on - strand, within OKFHMN_07285 at 1310.762 kb on - strand, within OKFHMN_07285 at 1310.775 kb on - strand, within OKFHMN_07285 at 1310.788 kb on - strand, within OKFHMN_07285 at 1310.882 kb on + strand, within OKFHMN_07285 at 1310.883 kb on - strand, within OKFHMN_07285 at 1310.965 kb on + strand, within OKFHMN_07285 at 1311.176 kb on - strand at 1311.213 kb on + strand at 1311.289 kb on - strand at 1311.513 kb on + strand, within djlC at 1311.595 kb on + strand, within djlC at 1311.596 kb on - strand, within djlC at 1311.646 kb on - strand, within djlC at 1311.646 kb on - strand, within djlC at 1311.862 kb on - strand, within ybeU at 1311.862 kb on - strand, within ybeU at 1311.973 kb on - strand, within ybeU at 1311.973 kb on - strand, within ybeU at 1311.975 kb on + strand, within ybeU at 1311.976 kb on - strand, within ybeU at 1311.994 kb on - strand, within ybeU
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,309,292 + hscC OKFHMN_07280 0.44 -1.0 1,309,292 + hscC OKFHMN_07280 0.44 +0.5 1,309,293 - hscC OKFHMN_07280 0.44 +0.5 1,309,587 - hscC OKFHMN_07280 0.62 +1.2 1,309,623 + hscC OKFHMN_07280 0.64 +0.1 1,309,653 + hscC OKFHMN_07280 0.66 +0.4 1,309,762 - hscC OKFHMN_07280 0.73 -0.5 1,309,878 + hscC OKFHMN_07280 0.79 +0.8 1,310,034 + hscC OKFHMN_07280 0.89 +0.0 1,310,198 - -0.0 1,310,201 + -0.1 1,310,201 + -1.2 1,310,475 - OKFHMN_07285 0.23 +0.4 1,310,517 - OKFHMN_07285 0.28 -1.0 1,310,520 - OKFHMN_07285 0.29 -0.3 1,310,762 - OKFHMN_07285 0.58 -0.4 1,310,775 - OKFHMN_07285 0.59 -1.0 1,310,788 - OKFHMN_07285 0.61 +0.5 1,310,882 + OKFHMN_07285 0.72 +1.0 1,310,883 - OKFHMN_07285 0.72 -0.3 1,310,965 + OKFHMN_07285 0.82 +0.3 1,311,176 - +0.1 1,311,213 + +1.0 1,311,289 - -0.8 1,311,513 + djlC OKFHMN_07290 0.52 +1.2 1,311,595 + djlC OKFHMN_07290 0.70 -1.4 1,311,596 - djlC OKFHMN_07290 0.70 +0.0 1,311,646 - djlC OKFHMN_07290 0.81 +1.0 1,311,646 - djlC OKFHMN_07290 0.81 +0.7 1,311,862 - ybeU OKFHMN_07295 0.19 -0.1 1,311,862 - ybeU OKFHMN_07295 0.19 -2.5 1,311,973 - ybeU OKFHMN_07295 0.35 +0.1 1,311,973 - ybeU OKFHMN_07295 0.35 +0.5 1,311,975 + ybeU OKFHMN_07295 0.35 +0.2 1,311,976 - ybeU OKFHMN_07295 0.35 -1.3 1,311,994 - ybeU OKFHMN_07295 0.38 -1.9
Or see this region's nucleotide sequence