Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt galT and galT are separated by 9 nucleotides galT and galK are separated by 3 nucleotides
OKFHMN_06715: galT - galactose-1-phosphate uridylyltransferase, at 1,197,347 to 1,198,363
galT
OKFHMN_06720: galT - galactose-1-phosphate uridylyltransferase, at 1,198,373 to 1,199,419
galT
OKFHMN_06725: galK - galactokinase, at 1,199,423 to 1,200,571
galK
Position (kb)
1198
1199
1200 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1197.946 kb on + strand, within galT at 1197.946 kb on + strand, within galT at 1197.947 kb on - strand, within galT at 1197.953 kb on + strand, within galT at 1197.954 kb on - strand, within galT at 1197.973 kb on - strand, within galT at 1198.035 kb on + strand, within galT at 1198.043 kb on + strand, within galT at 1198.043 kb on + strand, within galT at 1198.044 kb on - strand, within galT at 1198.053 kb on + strand, within galT at 1198.122 kb on - strand, within galT at 1198.203 kb on - strand, within galT at 1198.413 kb on - strand at 1198.506 kb on + strand, within galT at 1198.578 kb on - strand, within galT at 1198.590 kb on - strand, within galT at 1198.805 kb on + strand, within galT at 1198.855 kb on + strand, within galT at 1198.889 kb on - strand, within galT at 1198.974 kb on - strand, within galT at 1199.074 kb on - strand, within galT at 1199.168 kb on + strand, within galT at 1199.298 kb on + strand, within galT at 1199.299 kb on - strand, within galT at 1199.302 kb on + strand, within galT at 1199.303 kb on - strand, within galT at 1199.534 kb on + strand at 1199.705 kb on + strand, within galK at 1199.802 kb on + strand, within galK at 1199.927 kb on - strand, within galK at 1200.223 kb on + strand, within galK at 1200.289 kb on + strand, within galK at 1200.289 kb on + strand, within galK at 1200.290 kb on - strand, within galK at 1200.323 kb on - strand, within galK
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,197,946 + galT OKFHMN_06715 0.59 +1.2 1,197,946 + galT OKFHMN_06715 0.59 +0.5 1,197,947 - galT OKFHMN_06715 0.59 +1.0 1,197,953 + galT OKFHMN_06715 0.60 +2.1 1,197,954 - galT OKFHMN_06715 0.60 +0.4 1,197,973 - galT OKFHMN_06715 0.62 +1.3 1,198,035 + galT OKFHMN_06715 0.68 +1.3 1,198,043 + galT OKFHMN_06715 0.68 +1.1 1,198,043 + galT OKFHMN_06715 0.68 +1.6 1,198,044 - galT OKFHMN_06715 0.69 +0.9 1,198,053 + galT OKFHMN_06715 0.69 +0.6 1,198,122 - galT OKFHMN_06715 0.76 -0.3 1,198,203 - galT OKFHMN_06715 0.84 +0.7 1,198,413 - +1.2 1,198,506 + galT OKFHMN_06720 0.13 +0.4 1,198,578 - galT OKFHMN_06720 0.20 +0.6 1,198,590 - galT OKFHMN_06720 0.21 +0.9 1,198,805 + galT OKFHMN_06720 0.41 -0.0 1,198,855 + galT OKFHMN_06720 0.46 -3.3 1,198,889 - galT OKFHMN_06720 0.49 +0.7 1,198,974 - galT OKFHMN_06720 0.57 -1.8 1,199,074 - galT OKFHMN_06720 0.67 +0.6 1,199,168 + galT OKFHMN_06720 0.76 -0.6 1,199,298 + galT OKFHMN_06720 0.88 -0.9 1,199,299 - galT OKFHMN_06720 0.88 +1.8 1,199,302 + galT OKFHMN_06720 0.89 +0.4 1,199,303 - galT OKFHMN_06720 0.89 +0.7 1,199,534 + -1.2 1,199,705 + galK OKFHMN_06725 0.25 +0.4 1,199,802 + galK OKFHMN_06725 0.33 +0.3 1,199,927 - galK OKFHMN_06725 0.44 -1.6 1,200,223 + galK OKFHMN_06725 0.70 -0.3 1,200,289 + galK OKFHMN_06725 0.75 +0.6 1,200,289 + galK OKFHMN_06725 0.75 +0.4 1,200,290 - galK OKFHMN_06725 0.75 -0.3 1,200,323 - galK OKFHMN_06725 0.78 +0.5
Or see this region's nucleotide sequence