Strain Fitness in Escherichia coli ECRC100 around OKFHMN_04320

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdgkA and OKFHMN_04320 are separated by 685 nucleotidesOKFHMN_04320 and tnp-IS3 are separated by 205 nucleotidestnp-IS3 and tnp-IS3 overlap by 1 nucleotides OKFHMN_04315: dgkA - Diacylglycerol kinase, at 689,526 to 689,885 dgkA OKFHMN_04320: OKFHMN_04320 - restriction endonuclease, at 690,571 to 690,861 _04320 OKFHMN_04325: tnp-IS3 - IS3 family transposase, at 691,067 to 691,393 tnp-IS3 OKFHMN_04330: tnp-IS3 - IS3 family transposase, at 691,393 to 692,280 tnp-IS3 Position (kb) 690 691Strain fitness (log2 ratio) -1 0 1at 690.255 kb on - strandat 690.837 kb on + strandat 690.837 kb on + strandat 690.898 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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690,255 - -0.6
690,837 + -0.9
690,837 + +0.9
690,898 + +0.3

Or see this region's nucleotide sequence