Strain Fitness in Escherichia coli ECRC62 around BNILDI_22060

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,432,517	+	ybdK	BNILDI_22045	0.87	-0.7
4,432,666	-				+0.2
4,432,666	-				+1.1
4,432,669	+				+1.0
4,432,712	+				+0.1
4,432,746	+				+0.5
4,432,980	-				+0.8
4,432,998	+				+0.2
4,433,245	+	ybdF	BNILDI_22055	0.54	+0.4
4,433,245	+	ybdF	BNILDI_22055	0.54	-0.5
4,433,246	-	ybdF	BNILDI_22055	0.54	-0.3
4,433,425	+				+1.2
4,433,426	-				-0.5
4,433,427	+				-1.5
4,433,446	-				+0.6
4,433,574	-	nfsB	BNILDI_22060	0.10	+1.0
4,433,614	-	nfsB	BNILDI_22060	0.16	-4.2
4,433,676	-	nfsB	BNILDI_22060	0.26	+0.6
4,433,731	+	nfsB	BNILDI_22060	0.34	-2.8
4,433,894	+	nfsB	BNILDI_22060	0.59	+1.1
4,433,895	-	nfsB	BNILDI_22060	0.59	+1.3
4,433,937	+	nfsB	BNILDI_22060	0.66	-0.4
4,433,937	+	nfsB	BNILDI_22060	0.66	+0.1
4,433,938	-	nfsB	BNILDI_22060	0.66	-4.2
4,434,054	+	nfsB	BNILDI_22060	0.83	-0.0
4,434,055	-	nfsB	BNILDI_22060	0.84	+0.8
4,434,055	-	nfsB	BNILDI_22060	0.84	+0.5
4,434,159	+				+1.0
4,434,159	+				-0.2
4,434,159	+				+1.3
4,434,254	+				-0.4
4,434,254	+				+1.0
4,434,254	+				+0.0
4,434,380	-				+1.2
4,434,380	-				-3.4
4,434,382	+				+0.2
4,434,382	+				-1.9
4,434,458	-	ybdG	BNILDI_22065	0.15	-0.8
4,434,458	-	ybdG	BNILDI_22065	0.15	+0.3
4,434,491	-	ybdG	BNILDI_22065	0.18	+1.1
4,434,559	+	ybdG	BNILDI_22065	0.23	-0.1
4,434,596	+	ybdG	BNILDI_22065	0.26	-0.2
4,434,597	-	ybdG	BNILDI_22065	0.26	-3.5
4,434,631	+	ybdG	BNILDI_22065	0.29	+1.2
4,434,687	+	ybdG	BNILDI_22065	0.33	+3.1
4,434,701	-	ybdG	BNILDI_22065	0.35	+0.4
4,434,847	+	ybdG	BNILDI_22065	0.46	-0.1
4,434,982	+	ybdG	BNILDI_22065	0.57	-0.3
4,434,982	+	ybdG	BNILDI_22065	0.57	+1.0
4,435,055	-	ybdG	BNILDI_22065	0.63	+1.1
4,435,141	-	ybdG	BNILDI_22065	0.70	-2.0
4,435,148	+	ybdG	BNILDI_22065	0.70	+0.3