Strain Fitness in Escherichia coli ECRC62 around BNILDI_21795

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,380,646	+				+1.2
4,380,651	-				+0.2
4,380,726	+				+2.6
4,380,726	+				-0.7
4,380,727	-				+0.7
4,380,762	-				+0.6
4,380,879	-	tatE	BNILDI_21790	0.62	-0.1
4,380,891	-	tatE	BNILDI_21790	0.68	+0.2
4,380,924	+	tatE	BNILDI_21790	0.84	+0.7
4,380,925	-	tatE	BNILDI_21790	0.84	+0.3
4,380,941	+				-1.6
4,380,942	-				-2.3
4,380,945	-				+0.3
4,380,945	-				+0.4
4,380,956	+				+0.4
4,380,957	-				+0.2
4,380,960	+				+0.2
4,380,961	-				-3.3
4,380,973	+				-2.6
4,380,974	-				-1.3
4,380,976	-				-1.1
4,381,042	-				-0.3
4,381,091	+				+1.2
4,381,091	+				+0.9
4,381,229	+	tatE	BNILDI_21795	0.18	-0.2
4,381,229	+	tatE	BNILDI_21795	0.18	-1.5
4,381,230	-	tatE	BNILDI_21795	0.18	-3.1
4,381,230	-	tatE	BNILDI_21795	0.18	-0.2
4,381,230	-	tatE	BNILDI_21795	0.18	+1.0
4,381,230	-	tatE	BNILDI_21795	0.18	-1.6
4,381,282	+	tatE	BNILDI_21795	0.25	+0.9
4,381,283	-	tatE	BNILDI_21795	0.25	+0.1
4,381,283	-	tatE	BNILDI_21795	0.25	-0.6
4,381,283	-	tatE	BNILDI_21795	0.25	-0.4
4,381,285	-	tatE	BNILDI_21795	0.25	+0.4
4,381,285	-	tatE	BNILDI_21795	0.25	-1.5
4,381,285	-	tatE	BNILDI_21795	0.25	+0.4
4,381,285	-	tatE	BNILDI_21795	0.25	-0.1
4,381,425	-	tatE	BNILDI_21795	0.43	-1.7
4,381,533	+	tatE	BNILDI_21795	0.57	-1.0
4,381,534	-	tatE	BNILDI_21795	0.57	+1.2
4,381,534	-	tatE	BNILDI_21795	0.57	+1.6
4,381,658	-	tatE	BNILDI_21795	0.73	-3.4
4,381,712	-	tatE	BNILDI_21795	0.79	+0.3
4,381,931	+				+0.6
4,381,932	-				-0.2
4,381,941	-				+0.6
4,381,971	-				+2.7
4,381,982	+				-0.5
4,382,030	+	crcB	BNILDI_21800	0.17	+0.9
4,382,108	+	crcB	BNILDI_21800	0.37	-2.6
4,382,166	-	crcB	BNILDI_21800	0.52	-0.8
4,382,168	+	crcB	BNILDI_21800	0.53	+1.1
4,382,196	-	crcB	BNILDI_21800	0.60	+1.2
4,382,238	-	crcB	BNILDI_21800	0.71	-0.0
4,382,348	-				+1.1
4,382,521	-	cspE	BNILDI_21805	0.56	+0.5
4,382,589	-	cspE	BNILDI_21805	0.89	+0.3
4,382,601	-				+0.5
4,382,607	-				-0.7
4,382,625	+				+0.3
4,382,833	+				+2.2
4,382,833	+				-1.0
4,382,833	+				-1.5
4,382,833	+				-4.2
4,382,834	-				-0.2
4,382,834	-				-2.2
4,382,848	+	pagP	BNILDI_21810	0.11	+0.0