Strain Fitness in Escherichia coli ECRC62 around BNILDI_19800

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,973,575	+				-1.1
3,973,576	-				-1.0
3,973,619	-				-1.1
3,973,636	+				+1.1
3,974,121	-				+1.2
3,974,141	-				+0.2
3,974,144	-				-0.6
3,974,161	-				+1.8
3,974,171	+				-1.1
3,974,232	-				+0.0
3,974,279	+				-0.2
3,974,343	-				+0.8
3,974,345	-				+0.2
3,974,390	+				+1.4
3,974,421	+				-0.2
3,974,421	+				-1.0
3,974,425	+				-0.6
3,974,557	+	gfcA	BNILDI_19800	0.33	-0.0
3,974,560	+	gfcA	BNILDI_19800	0.34	-2.7
3,974,603	-	gfcA	BNILDI_19800	0.48	-3.0
3,974,605	+	gfcA	BNILDI_19800	0.49	-0.1
3,974,916	-				-0.6
3,975,025	-	gfcB	BNILDI_19805	0.24	-1.2
3,975,029	-	gfcB	BNILDI_19805	0.25	-0.0
3,975,072	-	gfcB	BNILDI_19805	0.32	-0.2
3,975,353	+	gfcB	BNILDI_19805	0.75	-0.6
3,975,528	-				-0.6
3,975,552	+				-0.8
3,975,593	+	gfcC	BNILDI_19810	0.11	+0.3
3,975,594	-	gfcC	BNILDI_19810	0.11	+1.9
3,975,594	-	gfcC	BNILDI_19810	0.11	-0.3
3,975,734	-	gfcC	BNILDI_19810	0.30	+0.4
3,975,740	+	gfcC	BNILDI_19810	0.31	+0.4