Strain Fitness in Escherichia coli ECRC62 around BNILDI_18835

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,789,144	+	dhaK	BNILDI_18825	0.69	+0.0
3,789,144	+	dhaK	BNILDI_18825	0.69	-0.2
3,789,145	-	dhaK	BNILDI_18825	0.69	-1.3
3,789,145	-	dhaK	BNILDI_18825	0.69	+0.3
3,789,291	+	dhaK	BNILDI_18825	0.83	+0.6
3,789,291	+	dhaK	BNILDI_18825	0.83	-2.0
3,789,346	+	dhaK	BNILDI_18825	0.88	-1.2
3,789,468	-				+0.5
3,789,557	-	dhaL	BNILDI_18830	0.12	+0.4
3,789,738	+	dhaL	BNILDI_18830	0.40	-0.1
3,789,738	+	dhaL	BNILDI_18830	0.40	-0.9
3,789,905	+	dhaL	BNILDI_18830	0.67	+0.3
3,789,988	-	dhaL	BNILDI_18830	0.80	-1.7
3,790,081	-				-0.4
3,790,114	+				+0.8
3,790,131	+				+0.9
3,790,143	+				+0.6
3,790,144	-				+0.9
3,790,210	+				-0.0
3,790,216	+				-1.1
3,790,350	+	dhaM	BNILDI_18835	0.16	+0.1
3,790,404	+	dhaM	BNILDI_18835	0.20	-1.6
3,790,435	+	dhaM	BNILDI_18835	0.22	-0.7
3,790,486	+	dhaM	BNILDI_18835	0.25	-0.5
3,790,487	-	dhaM	BNILDI_18835	0.25	+3.1
3,790,612	-	dhaM	BNILDI_18835	0.34	-0.2
3,790,636	-	dhaM	BNILDI_18835	0.36	-0.3
3,790,660	+	dhaM	BNILDI_18835	0.38	-1.7
3,790,870	+	dhaM	BNILDI_18835	0.52	-0.1
3,790,871	-	dhaM	BNILDI_18835	0.52	-2.4
3,790,991	-	dhaM	BNILDI_18835	0.61	+0.4
3,790,991	-	dhaM	BNILDI_18835	0.61	-0.1
3,791,007	+	dhaM	BNILDI_18835	0.62	-0.3
3,791,084	-	dhaM	BNILDI_18835	0.67	-1.0
3,791,084	-	dhaM	BNILDI_18835	0.67	-1.9
3,791,091	+	dhaM	BNILDI_18835	0.68	-0.1
3,791,091	+	dhaM	BNILDI_18835	0.68	-2.5
3,791,092	-	dhaM	BNILDI_18835	0.68	-1.7
3,791,216	+	dhaM	BNILDI_18835	0.77	-0.1
3,791,220	+	dhaM	BNILDI_18835	0.77	+2.4
3,791,317	+	dhaM	BNILDI_18835	0.84	-3.1
3,791,384	-	dhaM	BNILDI_18835	0.89	+1.0
3,791,478	-				-0.3
3,791,516	-				+0.8
3,791,588	+				-3.4
3,791,722	+				+0.1
3,791,734	+				+0.3
3,791,992	+		BNILDI_18840	0.11	-3.3
3,792,008	+		BNILDI_18840	0.12	+0.4
3,792,183	+		BNILDI_18840	0.27	-0.4
3,792,183	+		BNILDI_18840	0.27	+0.7
3,792,184	-		BNILDI_18840	0.27	-2.3
3,792,184	-		BNILDI_18840	0.27	+0.8
3,792,300	+		BNILDI_18840	0.37	-1.0
3,792,300	+		BNILDI_18840	0.37	-0.4
3,792,300	+		BNILDI_18840	0.37	+0.8
3,792,301	-		BNILDI_18840	0.37	+0.2
3,792,332	-		BNILDI_18840	0.40	+0.3
3,792,334	-		BNILDI_18840	0.40	-1.0
3,792,336	+		BNILDI_18840	0.40	+0.0
3,792,337	-		BNILDI_18840	0.40	+0.5
3,792,348	+		BNILDI_18840	0.41	+1.4
3,792,348	+		BNILDI_18840	0.41	-1.5
3,792,348	+		BNILDI_18840	0.41	-0.4
3,792,349	-		BNILDI_18840	0.41	-1.7
3,792,349	-		BNILDI_18840	0.41	-1.3
3,792,472	+		BNILDI_18840	0.52	-0.2
3,792,508	+		BNILDI_18840	0.55	+0.6
3,792,514	+		BNILDI_18840	0.55	-4.4