Strain Fitness in Escherichia coli ECRC62 around BNILDI_18355

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,698,504	+				-1.2
3,698,505	-				+0.6
3,698,509	+				-1.0
3,698,542	+				+0.4
3,698,679	-	yciT	BNILDI_18350	0.26	-0.9
3,698,691	+	yciT	BNILDI_18350	0.28	-0.2
3,698,692	-	yciT	BNILDI_18350	0.28	+0.4
3,698,694	-	yciT	BNILDI_18350	0.28	-1.1
3,698,823	-	yciT	BNILDI_18350	0.45	-1.8
3,698,841	+	yciT	BNILDI_18350	0.48	-3.3
3,698,841	+	yciT	BNILDI_18350	0.48	+0.8
3,698,841	+	yciT	BNILDI_18350	0.48	+0.7
3,698,841	+	yciT	BNILDI_18350	0.48	+1.5
3,698,898	+	yciT	BNILDI_18350	0.55	-0.2
3,698,956	+	yciT	BNILDI_18350	0.63	-2.9
3,698,956	+	yciT	BNILDI_18350	0.63	+0.4
3,699,109	+	yciT	BNILDI_18350	0.83	+0.4
3,699,110	-	yciT	BNILDI_18350	0.83	-0.4
3,699,118	-	yciT	BNILDI_18350	0.85	+0.6
3,699,204	-				-0.4
3,699,326	+				-2.8
3,699,390	+				-1.0
3,699,390	+				+0.2
3,699,444	-				+2.3
3,699,448	-				-2.8
3,699,452	+				-1.2
3,699,467	+				-3.1
3,699,498	+				+0.7
3,699,501	+				+0.3
3,699,586	-	osmB	BNILDI_18355	0.38	-0.7
3,699,671	+	osmB	BNILDI_18355	0.77	-0.4
3,699,672	-	osmB	BNILDI_18355	0.78	+0.6
3,699,942	-	yciH	BNILDI_18360	0.29	+0.6
3,700,099	-	yciH	BNILDI_18360	0.77	-0.5
3,700,125	-	yciH	BNILDI_18360	0.85	+0.2
3,700,187	+				-0.5
3,700,260	+	pyrF	BNILDI_18365	0.11	-3.7
3,700,260	+	pyrF	BNILDI_18365	0.11	-4.1
3,700,261	-	pyrF	BNILDI_18365	0.11	-4.9
3,700,261	-	pyrF	BNILDI_18365	0.11	-0.3
3,700,298	-	pyrF	BNILDI_18365	0.16	-3.7
3,700,298	-	pyrF	BNILDI_18365	0.16	-3.1
3,700,374	-	pyrF	BNILDI_18365	0.25	-5.2
3,700,595	-	pyrF	BNILDI_18365	0.53	-3.6
3,700,595	-	pyrF	BNILDI_18365	0.53	-1.7
3,700,638	-	pyrF	BNILDI_18365	0.58	-2.9