Strain Fitness in Escherichia coli ECRC62 around BNILDI_15660

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,148,498	-	purT	BNILDI_15655	0.44	-3.1
3,148,658	+	purT	BNILDI_15655	0.57	-0.7
3,148,905	-	purT	BNILDI_15655	0.78	-1.2
3,148,928	-	purT	BNILDI_15655	0.80	-0.4
3,148,928	-	purT	BNILDI_15655	0.80	-1.4
3,148,959	+	purT	BNILDI_15655	0.83	+0.0
3,148,960	-	purT	BNILDI_15655	0.83	-0.6
3,148,979	+	purT	BNILDI_15655	0.85	-1.2
3,148,982	+	purT	BNILDI_15655	0.85	+1.0
3,149,030	-	purT	BNILDI_15655	0.89	+0.8
3,149,109	+				-0.3
3,149,109	+				+0.1
3,149,110	-				+0.8
3,149,110	-				+1.0
3,149,110	-				-2.1
3,149,151	+				+0.6
3,149,151	+				-0.2
3,149,177	+				+0.4
3,149,311	+				+0.6
3,149,311	+				+0.9
3,149,311	+				-0.2
3,149,312	-				-0.0
3,149,374	+	yebG	BNILDI_15660	0.28	-0.6
3,149,374	+	yebG	BNILDI_15660	0.28	-2.6
3,149,379	+	yebG	BNILDI_15660	0.30	-1.1
3,149,610	-				+0.1
3,149,789	+	yebF	BNILDI_15665	0.39	+0.8
3,149,790	-	yebF	BNILDI_15665	0.39	+0.1
3,149,895	+	yebF	BNILDI_15665	0.69	+0.8
3,150,018	-		BNILDI_15670	0.47	-0.1
3,150,084	-		BNILDI_15670	0.79	+1.2
3,150,154	+				+0.1
3,150,188	-		BNILDI_15675	0.23	-0.1
3,150,188	-		BNILDI_15675	0.23	-0.2
3,150,192	+		BNILDI_15675	0.26	+0.1
3,150,192	+		BNILDI_15675	0.26	+1.1
3,150,193	-		BNILDI_15675	0.27	-0.3
3,150,193	-		BNILDI_15675	0.27	+0.2
3,150,197	-		BNILDI_15675	0.31	-0.2
3,150,197	-		BNILDI_15675	0.31	-0.2
3,150,201	+		BNILDI_15675	0.34	-2.7
3,150,244	+		BNILDI_15675	0.73	-0.6
3,150,270	-				-0.5
3,150,299	+				-0.6
3,150,347	-				+0.2
3,150,386	+				-1.8
3,150,440	-	yebE	BNILDI_15680	0.16	-0.3
3,150,471	-	yebE	BNILDI_15680	0.21	+1.8
3,150,471	-	yebE	BNILDI_15680	0.21	-3.2
3,150,482	+	yebE	BNILDI_15680	0.23	+0.4
3,150,492	-	yebE	BNILDI_15680	0.24	-0.2
3,150,498	+	yebE	BNILDI_15680	0.25	-0.7
3,150,561	+	yebE	BNILDI_15680	0.35	-1.4
3,150,561	+	yebE	BNILDI_15680	0.35	+0.4