Strain Fitness in Escherichia coli ECRC62 around BNILDI_13430

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,689,184	+				-3.0
2,689,184	+				-0.4
2,689,184	+				-2.7
2,689,206	+				-1.7
2,689,206	+				+1.1
2,689,206	+				-3.1
2,689,207	-				+1.7
2,689,234	+	nuoJ	BNILDI_13420	0.12	-1.3
2,689,578	-	nuoJ	BNILDI_13420	0.74	-1.4
2,689,581	+	nuoJ	BNILDI_13420	0.74	-2.6
2,689,603	+	nuoJ	BNILDI_13420	0.78	-2.3
2,689,604	-	nuoJ	BNILDI_13420	0.78	-2.6
2,689,604	-	nuoJ	BNILDI_13420	0.78	+0.3
2,689,809	+	nuoK	BNILDI_13425	0.29	-0.4
2,689,809	+	nuoK	BNILDI_13425	0.29	-1.3
2,689,810	-	nuoK	BNILDI_13425	0.30	-2.3
2,689,874	-	nuoK	BNILDI_13425	0.51	+0.5
2,689,904	-	nuoK	BNILDI_13425	0.61	-2.3
2,689,904	-	nuoK	BNILDI_13425	0.61	-1.1
2,689,904	-	nuoK	BNILDI_13425	0.61	-0.8
2,690,322	+	nuoL	BNILDI_13430	0.16	-1.5
2,690,323	-	nuoL	BNILDI_13430	0.17	+0.9
2,690,323	-	nuoL	BNILDI_13430	0.17	-4.5
2,690,374	-	nuoL	BNILDI_13430	0.19	+1.3
2,690,402	-	nuoL	BNILDI_13430	0.21	-2.2
2,690,436	+	nuoL	BNILDI_13430	0.23	-2.0
2,690,436	+	nuoL	BNILDI_13430	0.23	-2.4
2,690,469	+	nuoL	BNILDI_13430	0.24	-3.6
2,690,490	+	nuoL	BNILDI_13430	0.26	-4.4
2,690,490	+	nuoL	BNILDI_13430	0.26	-3.6
2,690,491	-	nuoL	BNILDI_13430	0.26	-1.8
2,691,126	-	nuoL	BNILDI_13430	0.60	-1.5
2,691,301	-	nuoL	BNILDI_13430	0.70	-2.4
2,691,799	-				-3.7
2,691,799	-				+0.6
2,691,851	-				-2.3
2,691,863	+				-3.4
2,691,890	+				-2.0
2,691,891	-				-3.9
2,691,892	+				-1.7
2,691,892	+				-0.9
2,691,893	-				+0.1
2,691,900	+				-4.1
2,692,029	-				-1.6
2,692,258	-	nuoM	BNILDI_13435	0.15	-2.2
2,692,258	-	nuoM	BNILDI_13435	0.15	-3.4
2,692,331	+	nuoM	BNILDI_13435	0.20	-1.6
2,692,331	+	nuoM	BNILDI_13435	0.20	-3.1
2,692,552	+	nuoM	BNILDI_13435	0.35	-4.2
2,692,642	+	nuoM	BNILDI_13435	0.40	-3.0
2,692,685	-	nuoM	BNILDI_13435	0.43	-2.9