Strain Fitness in Escherichia coli ECRC62 around BNILDI_12295

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,468,228	+				+0.7
2,468,272	+				+0.1
2,468,272	+				+0.7
2,468,273	-				-3.8
2,468,273	-				+0.2
2,468,316	+				+0.6
2,468,336	+				+0.3
2,468,336	+				-0.8
2,468,336	+				+1.2
2,468,337	-				-1.4
2,468,409	+				+0.6
2,468,563	+	arsC	BNILDI_12290	0.43	-2.1
2,468,564	-	arsC	BNILDI_12290	0.43	-0.6
2,468,664	+	arsC	BNILDI_12290	0.71	-3.1
2,468,780	-				-0.9
2,468,780	-				-1.9
2,468,799	+				+0.3
2,468,799	+				-1.0
2,468,799	+				+0.5
2,468,800	-				+1.1
2,468,809	-				-0.4
2,468,853	-				+2.2
2,469,039	+	bepA	BNILDI_12295	0.17	-0.5
2,469,040	-	bepA	BNILDI_12295	0.17	-0.1
2,469,060	+	bepA	BNILDI_12295	0.19	-0.9
2,469,095	+	bepA	BNILDI_12295	0.21	-0.5
2,469,136	+	bepA	BNILDI_12295	0.24	+0.1
2,469,137	-	bepA	BNILDI_12295	0.24	+1.3
2,469,264	+	bepA	BNILDI_12295	0.33	+2.1
2,469,278	+	bepA	BNILDI_12295	0.33	-2.5
2,469,314	+	bepA	BNILDI_12295	0.36	+0.7
2,469,314	+	bepA	BNILDI_12295	0.36	+0.6
2,469,315	-	bepA	BNILDI_12295	0.36	+1.0
2,469,384	+	bepA	BNILDI_12295	0.41	+0.7
2,469,396	+	bepA	BNILDI_12295	0.42	-2.0
2,469,398	+	bepA	BNILDI_12295	0.42	-0.2
2,469,399	-	bepA	BNILDI_12295	0.42	-2.4
2,469,699	+	bepA	BNILDI_12295	0.62	+0.1
2,469,751	-	bepA	BNILDI_12295	0.66	-0.1
2,469,853	-	bepA	BNILDI_12295	0.73	-0.7
2,470,027	-	bepA	BNILDI_12295	0.85	-0.6
2,470,028	+	bepA	BNILDI_12295	0.85	-2.3
2,470,028	+	bepA	BNILDI_12295	0.85	+1.0
2,470,051	-	bepA	BNILDI_12295	0.86	+1.1
2,470,055	-	bepA	BNILDI_12295	0.87	+0.8
2,470,085	+	bepA	BNILDI_12295	0.89	-4.1
2,470,086	-	bepA	BNILDI_12295	0.89	-0.2
2,470,086	-	bepA	BNILDI_12295	0.89	+0.3
2,470,088	+	bepA	BNILDI_12295	0.89	+0.2
2,470,089	-	bepA	BNILDI_12295	0.89	+0.2
2,470,203	+				-2.7
2,470,251	+				+0.2
2,470,303	-				+0.3
2,470,532	+				+0.9
2,470,557	-				-3.6
2,470,612	-	perM	BNILDI_12300	0.14	+0.6
2,470,612	-	perM	BNILDI_12300	0.14	-0.1
2,470,646	+	perM	BNILDI_12300	0.17	+1.9
2,470,647	-	perM	BNILDI_12300	0.17	+0.0
2,470,701	-	perM	BNILDI_12300	0.22	-0.1
2,470,702	+	perM	BNILDI_12300	0.22	+0.3
2,470,702	+	perM	BNILDI_12300	0.22	+0.1
2,470,702	+	perM	BNILDI_12300	0.22	+0.1
2,470,702	+	perM	BNILDI_12300	0.22	+0.2
2,470,702	+	perM	BNILDI_12300	0.22	-0.0
2,470,755	+	perM	BNILDI_12300	0.27	-0.2
2,470,756	-	perM	BNILDI_12300	0.27	-1.1
2,471,097	+	perM	BNILDI_12300	0.60	+0.5
2,471,098	-	perM	BNILDI_12300	0.60	-1.8
2,471,098	-	perM	BNILDI_12300	0.60	+0.3
2,471,098	-	perM	BNILDI_12300	0.60	-0.5
2,471,216	+	perM	BNILDI_12300	0.71	+0.1
2,471,223	+	perM	BNILDI_12300	0.71	+1.1