Strain Fitness in Escherichia coli ECRC62 around BNILDI_06795

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,359,918	+	dcuA	BNILDI_06785	0.32	+0.2
1,359,919	-	dcuA	BNILDI_06785	0.32	-0.2
1,360,079	+	dcuA	BNILDI_06785	0.45	-3.0
1,360,079	+	dcuA	BNILDI_06785	0.45	+0.9
1,360,080	-	dcuA	BNILDI_06785	0.45	+1.2
1,360,083	+	dcuA	BNILDI_06785	0.45	+0.2
1,360,084	-	dcuA	BNILDI_06785	0.45	-0.5
1,360,097	-	dcuA	BNILDI_06785	0.46	-1.5
1,360,097	-	dcuA	BNILDI_06785	0.46	+0.1
1,360,307	+	dcuA	BNILDI_06785	0.62	-2.4
1,360,307	+	dcuA	BNILDI_06785	0.62	-1.7
1,360,308	-	dcuA	BNILDI_06785	0.62	-0.7
1,360,343	+	dcuA	BNILDI_06785	0.65	+0.6
1,360,344	-	dcuA	BNILDI_06785	0.65	+1.3
1,360,344	-	dcuA	BNILDI_06785	0.65	-0.2
1,360,344	-	dcuA	BNILDI_06785	0.65	-2.5
1,360,477	+	dcuA	BNILDI_06785	0.75	-0.2
1,360,478	-	dcuA	BNILDI_06785	0.75	-0.4
1,360,478	-	dcuA	BNILDI_06785	0.75	+0.6
1,360,478	-	dcuA	BNILDI_06785	0.75	-2.3
1,360,512	-	dcuA	BNILDI_06785	0.78	-0.5
1,360,621	-	dcuA	BNILDI_06785	0.86	-0.1
1,360,728	+				+0.4
1,360,728	+				+0.3
1,360,733	-				+2.4
1,360,775	-				+0.3
1,360,787	-				-2.6
1,360,797	+				+0.5
1,360,797	+				-0.6
1,360,797	+				-0.3
1,360,798	-				+0.3
1,360,831	+				-1.1
1,360,894	+				-0.1
1,360,910	+				+0.1
1,361,111	+	aspA	BNILDI_06795	0.14	-2.0
1,361,112	-	aspA	BNILDI_06795	0.14	-1.6
1,361,116	-	aspA	BNILDI_06795	0.14	-1.4
1,361,142	-	aspA	BNILDI_06795	0.16	-1.9
1,361,202	-	aspA	BNILDI_06795	0.20	-1.3
1,361,262	+	aspA	BNILDI_06795	0.24	-3.7
1,361,335	+	aspA	BNILDI_06795	0.29	-3.5
1,361,369	-	aspA	BNILDI_06795	0.32	-2.1
1,361,373	+	aspA	BNILDI_06795	0.32	-1.1
1,361,374	-	aspA	BNILDI_06795	0.32	-2.8
1,361,518	-	aspA	BNILDI_06795	0.42	-3.4
1,361,522	+	aspA	BNILDI_06795	0.42	-1.9
1,361,522	+	aspA	BNILDI_06795	0.42	-2.5
1,361,523	-	aspA	BNILDI_06795	0.42	-1.3
1,361,692	-	aspA	BNILDI_06795	0.54	-2.9
1,361,823	+	aspA	BNILDI_06795	0.63	-0.3
1,361,823	+	aspA	BNILDI_06795	0.63	-1.1
1,361,823	+	aspA	BNILDI_06795	0.63	-2.2
1,361,823	+	aspA	BNILDI_06795	0.63	-2.2
1,361,860	+	aspA	BNILDI_06795	0.66	-1.3
1,361,861	-	aspA	BNILDI_06795	0.66	-2.5
1,361,861	-	aspA	BNILDI_06795	0.66	+1.1
1,361,909	+	aspA	BNILDI_06795	0.69	-3.7
1,361,960	+	aspA	BNILDI_06795	0.73	+0.2
1,362,174	+	aspA	BNILDI_06795	0.88	-3.3
1,362,248	+				-1.8
1,362,248	+				-1.7
1,362,284	+				-1.1
1,362,285	-				-2.5
1,362,287	+				-0.7
1,362,287	+				-2.5
1,362,288	-				+0.5
1,362,288	-				+0.8
1,362,288	-				+1.0
1,362,401	+				-1.1
1,362,401	+				-1.7
1,362,401	+				+0.1
1,362,467	+				-0.9
1,362,467	+				-3.0
1,362,492	-				-0.4
1,362,506	+				-2.0
1,362,528	-				-2.6
1,362,568	+				+0.9
1,362,617	+				-1.2
1,362,671	+				-1.2
1,362,675	-				+1.0
1,362,721	+				-1.2
1,362,728	-				-0.2
1,362,728	-				-2.8
1,362,764	+	fxsA	BNILDI_06800	0.16	+0.3
1,362,764	+	fxsA	BNILDI_06800	0.16	-3.5
1,362,765	-	fxsA	BNILDI_06800	0.16	-0.1
1,362,795	+	fxsA	BNILDI_06800	0.22	-0.1
1,362,796	-	fxsA	BNILDI_06800	0.23	-1.9
1,362,796	-	fxsA	BNILDI_06800	0.23	-2.7
1,362,827	+	fxsA	BNILDI_06800	0.29	+0.8
1,362,828	-	fxsA	BNILDI_06800	0.29	+0.3
1,362,944	+	fxsA	BNILDI_06800	0.54	-0.5
1,362,944	+	fxsA	BNILDI_06800	0.54	+0.9
1,362,986	+	fxsA	BNILDI_06800	0.62	+0.8
1,363,087	-	fxsA	BNILDI_06800	0.84	+0.4
1,363,298	-				+0.8
1,363,321	+	yjeH	BNILDI_06805	0.11	+0.1
1,363,322	-	yjeH	BNILDI_06805	0.11	-0.4
1,363,343	-	yjeH	BNILDI_06805	0.13	+0.5
1,363,343	-	yjeH	BNILDI_06805	0.13	+1.1