Strain Fitness in Escherichia coli ECRC62 around BNILDI_05830

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,158,229	+				+1.1
1,158,574	+	oxyR	BNILDI_05825	0.40	-2.4
1,158,711	+	oxyR	BNILDI_05825	0.55	+0.9
1,158,711	+	oxyR	BNILDI_05825	0.55	+1.2
1,158,712	-	oxyR	BNILDI_05825	0.55	+1.1
1,158,715	+	oxyR	BNILDI_05825	0.55	+0.6
1,158,716	-	oxyR	BNILDI_05825	0.55	-0.2
1,158,716	-	oxyR	BNILDI_05825	0.55	-1.3
1,158,855	+	oxyR	BNILDI_05825	0.70	-0.5
1,158,855	+	oxyR	BNILDI_05825	0.70	-1.6
1,158,973	+	oxyR	BNILDI_05825	0.83	-1.3
1,158,973	+	oxyR	BNILDI_05825	0.83	-0.2
1,159,008	+	oxyR	BNILDI_05825	0.87	-0.3
1,159,008	+	oxyR	BNILDI_05825	0.87	-0.2
1,159,021	+	oxyR	BNILDI_05825	0.89	-0.1
1,159,022	-	oxyR	BNILDI_05825	0.89	-2.2
1,159,194	-				-2.5
1,159,457	+	sthA	BNILDI_05830	0.25	-4.0
1,159,458	-	sthA	BNILDI_05830	0.25	-1.6
1,159,613	+	sthA	BNILDI_05830	0.36	-5.2
1,159,613	+	sthA	BNILDI_05830	0.36	+0.5
1,159,790	+	sthA	BNILDI_05830	0.49	-0.7
1,159,909	+	sthA	BNILDI_05830	0.57	-3.2
1,160,187	+	sthA	BNILDI_05830	0.77	-2.6
1,160,317	+	sthA	BNILDI_05830	0.86	-4.9
1,160,317	+	sthA	BNILDI_05830	0.86	-2.7
1,160,473	+				-4.6
1,160,473	+				-4.2
1,160,473	+				-5.0
1,160,476	+				+0.1
1,160,599	+				-0.1
1,160,600	-				+0.8
1,160,600	-				+1.0
1,160,652	+				-3.9
1,160,704	-				-0.5
1,160,708	-				-0.2
1,160,734	-				+0.8
1,160,768	+				-0.2
1,160,784	+				+0.2
1,160,784	+				-0.3
1,160,785	-				-4.1
1,160,790	-				-2.9
1,160,802	+				-1.3
1,160,850	-				+1.1
1,160,902	-	fabR	BNILDI_05835	0.17	+1.1
1,160,910	-	fabR	BNILDI_05835	0.18	+0.9
1,161,144	+	fabR	BNILDI_05835	0.51	+0.8
1,161,144	+	fabR	BNILDI_05835	0.51	+0.4
1,161,144	+	fabR	BNILDI_05835	0.51	+1.0
1,161,168	-	fabR	BNILDI_05835	0.54	-1.1
1,161,253	+	fabR	BNILDI_05835	0.66	+0.9
1,161,253	+	fabR	BNILDI_05835	0.66	-0.3
1,161,289	-	fabR	BNILDI_05835	0.71	+0.5
1,161,377	+	fabR	BNILDI_05835	0.84	+0.4
1,161,424	+				-1.2
1,161,424	+				+0.4
1,161,427	+				-0.0
1,161,428	-				+0.1