Strain Fitness in Escherichia coli ECRC62 around BNILDI_02575

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
485,647	+	yhfW	BNILDI_02570	0.25	-2.5
485,706	-	yhfW	BNILDI_02570	0.29	+0.4
485,706	-	yhfW	BNILDI_02570	0.29	-1.0
485,808	-	yhfW	BNILDI_02570	0.38	-0.1
485,890	+	yhfW	BNILDI_02570	0.44	-0.2
485,924	-	yhfW	BNILDI_02570	0.47	+1.1
485,954	+	yhfW	BNILDI_02570	0.50	-0.9
485,954	+	yhfW	BNILDI_02570	0.50	+1.9
486,023	+	yhfW	BNILDI_02570	0.55	+0.7
486,024	-	yhfW	BNILDI_02570	0.55	-1.9
486,024	-	yhfW	BNILDI_02570	0.55	+0.6
486,117	-	yhfW	BNILDI_02570	0.63	+0.7
486,117	-	yhfW	BNILDI_02570	0.63	+0.7
486,118	+	yhfW	BNILDI_02570	0.63	+0.1
486,129	+	yhfW	BNILDI_02570	0.64	-0.0
486,228	+	yhfW	BNILDI_02570	0.72	+2.4
486,229	-	yhfW	BNILDI_02570	0.72	-1.2
486,324	-	yhfW	BNILDI_02570	0.80	+0.6
486,542	+				-0.4
486,574	-				+0.0
486,741	+	yhfX	BNILDI_02575	0.15	-1.2
486,742	-	yhfX	BNILDI_02575	0.15	-0.0
486,861	+	yhfX	BNILDI_02575	0.25	-3.3
486,861	+	yhfX	BNILDI_02575	0.25	-0.2
486,861	+	yhfX	BNILDI_02575	0.25	+0.1
486,896	+	yhfX	BNILDI_02575	0.28	+1.1
486,897	-	yhfX	BNILDI_02575	0.28	+0.7
486,993	+	yhfX	BNILDI_02575	0.36	+0.5
487,060	+	yhfX	BNILDI_02575	0.42	-0.5
487,165	+	yhfX	BNILDI_02575	0.51	-0.0
487,165	+	yhfX	BNILDI_02575	0.51	+0.4
487,233	-	yhfX	BNILDI_02575	0.57	+1.1
487,278	+	yhfX	BNILDI_02575	0.61	+0.2
487,279	-	yhfX	BNILDI_02575	0.61	-0.2
487,354	+	yhfX	BNILDI_02575	0.67	+1.4
487,419	-	yhfX	BNILDI_02575	0.73	+0.0
487,479	+	yhfX	BNILDI_02575	0.78	-3.4
487,566	+	yhfX	BNILDI_02575	0.85	+0.8
487,566	+	yhfX	BNILDI_02575	0.85	-0.1
487,567	-	yhfX	BNILDI_02575	0.85	-0.3
487,567	-	yhfX	BNILDI_02575	0.85	-0.7
487,683	-				+0.6
487,727	+				+0.4
487,727	+				-0.2
487,727	+				-0.1
487,871	+	yhfY	BNILDI_02580	0.14	+0.4
487,996	+	yhfY	BNILDI_02580	0.49	-2.1
488,037	+	yhfY	BNILDI_02580	0.60	-1.5
488,037	+	yhfY	BNILDI_02580	0.60	-1.4
488,038	-	yhfY	BNILDI_02580	0.60	+0.0
488,038	-	yhfY	BNILDI_02580	0.60	-0.3
488,038	-	yhfY	BNILDI_02580	0.60	+1.1
488,136	+	yhfY	BNILDI_02580	0.87	-0.6
488,202	+				-0.8
488,203	-				+1.4
488,260	+				+1.0
488,261	-				+1.3
488,450	+	yhfZ	BNILDI_02585	0.28	-1.4
488,464	-	yhfZ	BNILDI_02585	0.29	+1.2
488,578	+	yhfZ	BNILDI_02585	0.42	+0.1
488,579	-	yhfZ	BNILDI_02585	0.42	+0.1
488,607	+	yhfZ	BNILDI_02585	0.45	-0.6
488,607	+	yhfZ	BNILDI_02585	0.45	-3.5
488,608	-	yhfZ	BNILDI_02585	0.45	+0.7
488,658	+	yhfZ	BNILDI_02585	0.51	-0.1
488,659	-	yhfZ	BNILDI_02585	0.51	-0.4
488,697	+	yhfZ	BNILDI_02585	0.55	+1.4
488,698	-	yhfZ	BNILDI_02585	0.55	-0.7
488,707	+	yhfZ	BNILDI_02585	0.56	-2.1
488,711	+	yhfZ	BNILDI_02585	0.57	-0.2