Strain Fitness in Escherichia coli ECRC62 around BNILDI_19740

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
3,960,685	+	yccE	BNILDI_19735	0.75	+0.1
3,961,002	-				+1.2
3,961,099	+				-1.0
3,961,160	+				-0.1
3,961,161	-				-1.6
3,961,204	-				+0.4
3,961,204	-				+0.3
3,961,212	+				+0.7
3,961,355	+	cbpA	BNILDI_19740	0.10	+0.2
3,961,356	-	cbpA	BNILDI_19740	0.10	+0.3
3,961,356	-	cbpA	BNILDI_19740	0.10	+0.6
3,961,429	-	cbpA	BNILDI_19740	0.18	-0.5
3,961,529	-	cbpA	BNILDI_19740	0.29	+0.7
3,961,529	-	cbpA	BNILDI_19740	0.29	-0.7
3,961,683	-	cbpA	BNILDI_19740	0.46	-0.2
3,961,685	-	cbpA	BNILDI_19740	0.46	+0.1
3,961,852	+	cbpA	BNILDI_19740	0.64	+0.9
3,961,939	+	cbpA	BNILDI_19740	0.74	-1.6
3,961,939	+	cbpA	BNILDI_19740	0.74	-0.2
3,961,939	+	cbpA	BNILDI_19740	0.74	+0.9
3,961,940	-	cbpA	BNILDI_19740	0.74	+1.2
3,962,206	-				+1.3
3,962,206	-				-1.3
3,962,313	-	cbpM	BNILDI_19745	0.43	-1.5
3,962,418	+	cbpM	BNILDI_19745	0.77	-0.3
3,962,418	+	cbpM	BNILDI_19745	0.77	+0.4
3,962,419	-	cbpM	BNILDI_19745	0.77	+0.5
3,962,620	-				-0.1
3,962,656	+	torD	BNILDI_19750	0.13	-0.1
3,962,656	+	torD	BNILDI_19750	0.13	-1.6
3,962,857	-	torD	BNILDI_19750	0.46	-1.4
3,962,983	-	torD	BNILDI_19750	0.67	-0.7
3,963,000	-	torD	BNILDI_19750	0.70	-1.6