Strain Fitness in Escherichia coli ECRC62 around BNILDI_13155

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,634,026	-	fimA	BNILDI_13145	0.19	-0.3
2,634,080	-	fimA	BNILDI_13145	0.31	+0.4
2,634,080	-	fimA	BNILDI_13145	0.31	-1.2
2,634,091	+	fimA	BNILDI_13145	0.33	+0.8
2,634,227	-	fimA	BNILDI_13145	0.62	+1.0
2,634,281	-	fimA	BNILDI_13145	0.73	+0.2
2,634,309	+	fimA	BNILDI_13145	0.79	+1.2
2,634,393	+				+0.5
2,634,394	-				-0.1
2,634,467	+	fimA	BNILDI_13150	0.12	-1.4
2,634,468	-	fimA	BNILDI_13150	0.12	-0.7
2,634,468	-	fimA	BNILDI_13150	0.12	-0.8
2,634,501	-	fimA	BNILDI_13150	0.19	+0.0
2,634,528	+	fimA	BNILDI_13150	0.24	+0.6
2,634,582	-	fimA	BNILDI_13150	0.34	-0.5
2,634,639	+	fimA	BNILDI_13150	0.45	+0.8
2,634,639	+	fimA	BNILDI_13150	0.45	-0.1
2,634,645	+	fimA	BNILDI_13150	0.46	-0.2
2,634,645	+	fimA	BNILDI_13150	0.46	-0.3
2,634,665	+	fimA	BNILDI_13150	0.50	-0.7
2,634,665	+	fimA	BNILDI_13150	0.50	+1.7
2,634,666	-	fimA	BNILDI_13150	0.50	-1.0
2,634,695	+	fimA	BNILDI_13150	0.56	-1.0
2,634,790	-	fimA	BNILDI_13150	0.74	-4.1
2,634,790	-	fimA	BNILDI_13150	0.74	+0.9
2,634,825	+	fimA	BNILDI_13150	0.80	+1.0
2,634,826	-	fimA	BNILDI_13150	0.81	+0.2
2,634,875	+				+4.0
2,634,919	+				-0.9
2,634,920	-				-1.0
2,634,945	+				+0.4
2,635,002	-				+0.8
2,635,012	+				-2.3
2,635,018	+				+0.2
2,635,018	+				-1.7
2,635,018	+				-1.9
2,635,019	-				-0.3
2,635,019	-				-1.3
2,635,049	+				-1.4
2,635,050	-				+0.2
2,635,102	+		BNILDI_13155	0.11	-1.3
2,635,131	-		BNILDI_13155	0.15	-0.2
2,635,131	-		BNILDI_13155	0.15	+0.3
2,635,231	+		BNILDI_13155	0.28	+0.4
2,635,232	-		BNILDI_13155	0.28	+0.2
2,635,261	-		BNILDI_13155	0.32	+0.4
2,635,261	-		BNILDI_13155	0.32	+1.0
2,635,265	-		BNILDI_13155	0.32	+0.5
2,635,286	+		BNILDI_13155	0.35	-0.4
2,635,286	+		BNILDI_13155	0.35	+0.3
2,635,286	+		BNILDI_13155	0.35	+0.6
2,635,287	-		BNILDI_13155	0.35	+0.6
2,635,288	+		BNILDI_13155	0.35	-2.5
2,635,289	-		BNILDI_13155	0.35	-0.8
2,635,289	-		BNILDI_13155	0.35	-0.3
2,635,322	+		BNILDI_13155	0.39	-2.4
2,635,323	-		BNILDI_13155	0.40	+0.4
2,635,349	+		BNILDI_13155	0.43	+0.1
2,635,349	+		BNILDI_13155	0.43	-0.9
2,635,349	+		BNILDI_13155	0.43	-2.1
2,635,350	-		BNILDI_13155	0.43	-0.3
2,635,382	+		BNILDI_13155	0.47	-0.8
2,635,383	-		BNILDI_13155	0.47	-1.2
2,635,402	+		BNILDI_13155	0.50	+0.6
2,635,410	+		BNILDI_13155	0.51	+1.0
2,635,411	-		BNILDI_13155	0.51	-0.1
2,635,436	+		BNILDI_13155	0.54	+0.5
2,635,628	-		BNILDI_13155	0.79	+1.3
2,635,645	+		BNILDI_13155	0.82	+0.1
2,635,695	+		BNILDI_13155	0.88	+0.7
2,635,696	-		BNILDI_13155	0.88	-1.3
2,635,696	-		BNILDI_13155	0.88	+0.4
2,635,698	+		BNILDI_13155	0.88	-0.1
2,635,770	+				+0.2
2,635,770	+				-0.8
2,635,770	+				+0.7
2,635,771	-				-2.2
2,635,784	+				-1.6
2,635,792	-				-0.3
2,635,795	-				+0.1
2,636,239	+	smrB	BNILDI_13160	0.60	-1.7
2,636,239	+	smrB	BNILDI_13160	0.60	+0.3
2,636,239	+	smrB	BNILDI_13160	0.60	-0.2
2,636,240	-	smrB	BNILDI_13160	0.60	-0.4
2,636,258	+	smrB	BNILDI_13160	0.63	-0.8
2,636,262	+	smrB	BNILDI_13160	0.64	-3.0
2,636,262	+	smrB	BNILDI_13160	0.64	+1.2
2,636,263	-	smrB	BNILDI_13160	0.64	+0.8
2,636,263	-	smrB	BNILDI_13160	0.64	+1.0
2,636,263	-	smrB	BNILDI_13160	0.64	+0.0
2,636,290	+	smrB	BNILDI_13160	0.69	+0.7
2,636,291	-	smrB	BNILDI_13160	0.69	+2.0
2,636,461	+				-0.2
2,636,461	+				+0.1
2,636,472	-				-0.1
2,636,528	+				-0.9
2,636,563	+				+0.1
2,636,563	+				+2.3
2,636,586	-				-1.0
2,636,623	-				-1.1
2,636,623	-				-3.2
2,636,761	+	prmB	BNILDI_13165	0.15	-0.6