Strain Fitness in Escherichia coli ECRC62 around BNILDI_10065

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,019,797	-	uacT	BNILDI_10060	0.61	-0.1
2,019,874	+	uacT	BNILDI_10060	0.67	-0.4
2,019,890	-	uacT	BNILDI_10060	0.68	+0.4
2,019,890	-	uacT	BNILDI_10060	0.68	-0.6
2,019,953	+	uacT	BNILDI_10060	0.72	+1.9
2,019,954	-	uacT	BNILDI_10060	0.72	+0.8
2,019,954	-	uacT	BNILDI_10060	0.72	-1.2
2,019,992	+	uacT	BNILDI_10060	0.75	+1.9
2,020,066	+	uacT	BNILDI_10060	0.80	+0.3
2,020,067	-	uacT	BNILDI_10060	0.80	+0.1
2,020,067	-	uacT	BNILDI_10060	0.80	+0.9
2,020,091	-	uacT	BNILDI_10060	0.82	-0.1
2,020,108	+	uacT	BNILDI_10060	0.83	+1.3
2,020,154	-	uacT	BNILDI_10060	0.86	+0.1
2,020,168	+	uacT	BNILDI_10060	0.87	+0.2
2,020,204	+	uacT	BNILDI_10060	0.90	-0.2
2,020,205	-	uacT	BNILDI_10060	0.90	-0.8
2,020,230	+				+0.6
2,020,231	-				+0.2
2,020,231	-				+0.0
2,020,259	+				-0.3
2,020,281	-				+0.6
2,020,281	-				-2.0
2,020,284	-				+0.6
2,020,344	-				-0.3
2,020,600	-				-1.9
2,020,718	+				+0.7
2,020,725	+				+0.6
2,020,728	-				+0.3
2,020,772	+				+0.8
2,020,825	+				-1.5
2,020,825	+				+0.3
2,020,826	-				+0.4
2,020,826	-				+1.1
2,021,028	+	ygfT	BNILDI_10065	0.12	+0.5
2,021,051	-	ygfT	BNILDI_10065	0.14	+0.2
2,021,059	+	ygfT	BNILDI_10065	0.14	-0.6
2,021,223	+	ygfT	BNILDI_10065	0.23	-1.1
2,021,223	+	ygfT	BNILDI_10065	0.23	+0.7
2,021,370	+	ygfT	BNILDI_10065	0.30	+0.7
2,021,373	-	ygfT	BNILDI_10065	0.30	+0.1
2,021,402	+	ygfT	BNILDI_10065	0.32	-1.4
2,021,440	+	ygfT	BNILDI_10065	0.34	-0.2
2,021,441	-	ygfT	BNILDI_10065	0.34	-0.1
2,021,513	-	ygfT	BNILDI_10065	0.38	-0.3
2,021,571	+	ygfT	BNILDI_10065	0.41	+1.0
2,021,571	+	ygfT	BNILDI_10065	0.41	+0.9
2,021,572	-	ygfT	BNILDI_10065	0.41	-1.4
2,021,606	-	ygfT	BNILDI_10065	0.42	-1.3
2,021,606	-	ygfT	BNILDI_10065	0.42	-0.3
2,021,654	+	ygfT	BNILDI_10065	0.45	-1.7
2,021,654	+	ygfT	BNILDI_10065	0.45	+0.6
2,021,758	-	ygfT	BNILDI_10065	0.50	-0.2
2,021,926	+	ygfT	BNILDI_10065	0.59	-0.6
2,021,951	-	ygfT	BNILDI_10065	0.60	+1.0
2,021,976	-	ygfT	BNILDI_10065	0.62	-1.3
2,022,143	-	ygfT	BNILDI_10065	0.70	-0.5
2,022,330	-	ygfT	BNILDI_10065	0.80	+0.3
2,022,330	-	ygfT	BNILDI_10065	0.80	-0.2
2,022,566	+				+1.2
2,022,567	-				-0.7
2,022,570	+				-0.0
2,022,570	+				+0.4
2,022,570	+				-0.4
2,022,570	+				-1.2
2,022,571	-				-1.1
2,022,571	-				+0.3
2,022,571	-				+0.2
2,022,681	+				-1.6
2,022,681	+				-0.6
2,022,682	-				+1.4
2,022,682	-				-0.3
2,022,723	+				+0.4
2,022,729	+				+0.6
2,022,729	+				+0.7
2,022,744	+				-0.2
2,022,757	-				+0.8
2,022,966	+	ygfS	BNILDI_10070	0.53	+0.4
2,022,967	-	ygfS	BNILDI_10070	0.53	+0.5
2,023,167	+				-0.1
2,023,234	+				-0.5
2,023,235	-				+0.2
2,023,358	+				-0.2
2,023,359	-				+0.4
2,023,373	+	ghxQ	BNILDI_10075	0.10	+0.6
2,023,376	+	ghxQ	BNILDI_10075	0.10	-0.0
2,023,376	+	ghxQ	BNILDI_10075	0.10	-3.4
2,023,377	-	ghxQ	BNILDI_10075	0.11	+0.4
2,023,377	-	ghxQ	BNILDI_10075	0.11	-1.4
2,023,377	-	ghxQ	BNILDI_10075	0.11	+2.7
2,023,461	+	ghxQ	BNILDI_10075	0.17	-0.5
2,023,461	+	ghxQ	BNILDI_10075	0.17	-0.1
2,023,461	+	ghxQ	BNILDI_10075	0.17	-0.4
2,023,462	-	ghxQ	BNILDI_10075	0.17	+0.1
2,023,462	-	ghxQ	BNILDI_10075	0.17	+2.0
2,023,480	+	ghxQ	BNILDI_10075	0.18	-0.2
2,023,533	+	ghxQ	BNILDI_10075	0.22	+0.0
2,023,625	-	ghxQ	BNILDI_10075	0.29	+0.5
2,023,625	-	ghxQ	BNILDI_10075	0.29	+0.5
2,023,662	+	ghxQ	BNILDI_10075	0.31	+0.2