Strain Fitness in Escherichia coli ECRC62 around BNILDI_08140

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
1,623,145	-	creC	BNILDI_08135	0.45	-0.1
1,623,145	-	creC	BNILDI_08135	0.45	+0.9
1,623,167	+	creC	BNILDI_08135	0.47	-1.3
1,623,167	+	creC	BNILDI_08135	0.47	-1.0
1,623,198	-	creC	BNILDI_08135	0.49	+0.3
1,623,233	+	creC	BNILDI_08135	0.52	-0.2
1,623,273	+	creC	BNILDI_08135	0.54	-0.0
1,623,273	+	creC	BNILDI_08135	0.54	-2.3
1,623,274	-	creC	BNILDI_08135	0.54	-0.7
1,623,298	+	creC	BNILDI_08135	0.56	-0.0
1,623,299	-	creC	BNILDI_08135	0.56	+0.5
1,623,341	-	creC	BNILDI_08135	0.59	-1.3
1,623,364	+	creC	BNILDI_08135	0.61	+0.2
1,623,422	-	creC	BNILDI_08135	0.65	+0.9
1,623,430	+	creC	BNILDI_08135	0.65	+1.7
1,623,431	-	creC	BNILDI_08135	0.65	-0.0
1,623,496	+	creC	BNILDI_08135	0.70	+0.6
1,623,496	+	creC	BNILDI_08135	0.70	-0.1
1,623,553	+	creC	BNILDI_08135	0.74	-2.8
1,623,553	+	creC	BNILDI_08135	0.74	+0.0
1,623,553	+	creC	BNILDI_08135	0.74	+1.1
1,623,554	-	creC	BNILDI_08135	0.74	-2.5
1,623,561	-	creC	BNILDI_08135	0.75	+0.0
1,623,622	+	creC	BNILDI_08135	0.79	-0.0
1,623,645	-	creC	BNILDI_08135	0.80	+0.4
1,623,769	-	creC	BNILDI_08135	0.89	-0.1
1,623,921	+				-0.5
1,623,922	-				+0.7
1,623,922	-				+1.2
1,623,922	-				-1.6
1,623,922	-				-0.1
1,623,980	+				-1.0
1,623,981	-				-0.6
1,624,030	+				-0.8
1,624,031	-				-0.5
1,624,031	-				-1.1
1,624,182	+	creD	BNILDI_08140	0.15	-0.5
1,624,184	+	creD	BNILDI_08140	0.15	-0.3
1,624,203	-	creD	BNILDI_08140	0.16	-0.1
1,624,302	+	creD	BNILDI_08140	0.24	-0.0
1,624,303	-	creD	BNILDI_08140	0.24	+0.1
1,624,331	-	creD	BNILDI_08140	0.26	+1.1
1,624,337	-	creD	BNILDI_08140	0.26	-0.1
1,624,385	+	creD	BNILDI_08140	0.30	-0.0
1,624,386	-	creD	BNILDI_08140	0.30	-0.2
1,624,393	+	creD	BNILDI_08140	0.30	+0.8
1,624,393	+	creD	BNILDI_08140	0.30	+0.2
1,624,407	-	creD	BNILDI_08140	0.31	-0.6
1,624,502	-	creD	BNILDI_08140	0.39	+0.1
1,624,526	+	creD	BNILDI_08140	0.40	+0.1
1,624,527	-	creD	BNILDI_08140	0.40	+0.0
1,624,706	+	creD	BNILDI_08140	0.54	-0.8
1,624,752	-	creD	BNILDI_08140	0.57	-2.7
1,624,755	-	creD	BNILDI_08140	0.57	+0.8
1,624,872	+	creD	BNILDI_08140	0.66	-2.7
1,624,989	+	creD	BNILDI_08140	0.75	-0.1
1,624,990	-	creD	BNILDI_08140	0.75	+0.3
1,624,990	-	creD	BNILDI_08140	0.75	-0.3
1,625,018	+	creD	BNILDI_08140	0.77	-0.0
1,625,079	+	creD	BNILDI_08140	0.81	-0.7
1,625,080	-	creD	BNILDI_08140	0.81	-0.3
1,625,246	+				+0.3
1,625,247	-				-2.0
1,625,247	-				+0.1
1,625,300	+				-0.6
1,625,301	-				-0.0
1,625,317	+				-0.1
1,625,317	+				-0.2
1,625,317	+				+0.8
1,625,318	-				+0.6
1,625,321	+				-0.1
1,625,322	-				+1.3
1,625,331	+				-0.1
1,626,028	-	arcA	BNILDI_08145	0.89	-1.1
1,626,219	+				+0.1
1,626,265	-				+0.4
1,626,265	-				+0.1