Strain Fitness in Escherichia coli ECRC100 around OKFHMN_23145

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,512,415	+	yfaA	OKFHMN_23135	0.86	+0.7
4,512,418	-	yfaA	OKFHMN_23135	0.86	+1.6
4,512,556	+				-0.8
4,512,557	-				+0.6
4,512,611	+				+0.5
4,512,842	+	yfaT	OKFHMN_23140	0.34	-0.2
4,512,877	-	yfaT	OKFHMN_23140	0.40	-0.8
4,512,987	+	yfaT	OKFHMN_23140	0.58	-0.3
4,513,001	+	yfaT	OKFHMN_23140	0.60	+0.5
4,513,093	-	yfaT	OKFHMN_23140	0.75	+0.1
4,513,101	+	yfaT	OKFHMN_23140	0.76	-1.4
4,513,164	-	yfaT	OKFHMN_23140	0.86	-2.4
4,513,225	-				-0.3
4,513,291	+				-0.8
4,513,373	-				-0.2
4,513,565	-				+0.1
4,513,621	+				+0.1
4,513,707	-				+0.1
4,513,707	-				+0.1
4,513,710	+				-1.0
4,513,710	+				-1.5
4,513,710	+				+1.3
4,513,711	-				+0.8
4,513,711	-				+0.0
4,513,784	-	yfaS	OKFHMN_23145	0.10	-0.2
4,513,863	-	yfaS	OKFHMN_23145	0.12	-0.6
4,513,864	+	yfaS	OKFHMN_23145	0.12	-0.5
4,513,967	-	yfaS	OKFHMN_23145	0.15	+0.1
4,514,109	+	yfaS	OKFHMN_23145	0.19	+1.6
4,514,116	+	yfaS	OKFHMN_23145	0.19	-0.4
4,514,116	+	yfaS	OKFHMN_23145	0.19	-0.2
4,514,116	+	yfaS	OKFHMN_23145	0.19	-0.8
4,514,116	+	yfaS	OKFHMN_23145	0.19	+0.8
4,514,117	-	yfaS	OKFHMN_23145	0.19	+1.3
4,514,117	-	yfaS	OKFHMN_23145	0.19	+0.6
4,514,117	-	yfaS	OKFHMN_23145	0.19	-0.1
4,514,118	+	yfaS	OKFHMN_23145	0.19	+0.4
4,514,119	-	yfaS	OKFHMN_23145	0.19	+1.6
4,514,135	+	yfaS	OKFHMN_23145	0.19	+0.7
4,514,135	+	yfaS	OKFHMN_23145	0.19	+0.2
4,514,136	-	yfaS	OKFHMN_23145	0.20	-1.5
4,514,227	+	yfaS	OKFHMN_23145	0.22	+1.3
4,514,241	+	yfaS	OKFHMN_23145	0.22	+1.9
4,514,484	-	yfaS	OKFHMN_23145	0.29	+0.4
4,514,486	-	yfaS	OKFHMN_23145	0.29	-1.2
4,514,538	+	yfaS	OKFHMN_23145	0.30	+0.6
4,514,687	+	yfaS	OKFHMN_23145	0.34	-0.9
4,514,884	-	yfaS	OKFHMN_23145	0.39	-2.7
4,514,900	+	yfaS	OKFHMN_23145	0.40	-3.4
4,514,906	-	yfaS	OKFHMN_23145	0.40	+0.4
4,514,906	-	yfaS	OKFHMN_23145	0.40	+0.9
4,514,968	+	yfaS	OKFHMN_23145	0.41	-2.0
4,514,972	+	yfaS	OKFHMN_23145	0.42	-2.4
4,514,973	-	yfaS	OKFHMN_23145	0.42	+0.3
4,514,973	-	yfaS	OKFHMN_23145	0.42	+0.2
4,514,973	-	yfaS	OKFHMN_23145	0.42	+0.1
4,515,088	+	yfaS	OKFHMN_23145	0.45	+0.3
4,515,115	-	yfaS	OKFHMN_23145	0.45	+2.1
4,515,143	-	yfaS	OKFHMN_23145	0.46	-0.2
4,515,157	+	yfaS	OKFHMN_23145	0.46	-0.4
4,515,162	+	yfaS	OKFHMN_23145	0.47	+0.4
4,515,162	+	yfaS	OKFHMN_23145	0.47	+1.6
4,515,221	-	yfaS	OKFHMN_23145	0.48	-0.7
4,515,250	-	yfaS	OKFHMN_23145	0.49	-0.1
4,515,328	-	yfaS	OKFHMN_23145	0.51	+1.5
4,515,380	-	yfaS	OKFHMN_23145	0.52	+1.6
4,515,401	+	yfaS	OKFHMN_23145	0.53	-0.1
4,515,685	+	yfaS	OKFHMN_23145	0.60	-1.3
4,515,693	-	yfaS	OKFHMN_23145	0.60	+0.4
4,515,935	+	yfaS	OKFHMN_23145	0.67	-0.5
4,515,960	-	yfaS	OKFHMN_23145	0.68	-1.0
4,516,021	+	yfaS	OKFHMN_23145	0.69	+0.5
4,516,021	+	yfaS	OKFHMN_23145	0.69	-1.3
4,516,121	-	yfaS	OKFHMN_23145	0.72	-0.9
4,516,159	-	yfaS	OKFHMN_23145	0.73	-1.1
4,516,646	+	yfaS	OKFHMN_23145	0.86	+0.1
4,516,657	+	yfaS	OKFHMN_23145	0.86	-0.8
4,516,657	+	yfaS	OKFHMN_23145	0.86	-2.0
4,516,658	-	yfaS	OKFHMN_23145	0.86	-0.4
4,516,688	-	yfaS	OKFHMN_23145	0.87	-0.0
4,516,834	+				+0.2
4,517,125	+				+0.1
4,517,182	+				-1.2
4,517,187	+				+0.4
4,517,259	+				+0.0
4,517,357	-		OKFHMN_23150	0.23	-0.5
4,517,618	+		OKFHMN_23150	0.70	-0.1
4,517,619	-		OKFHMN_23150	0.70	-0.3
4,517,621	-		OKFHMN_23150	0.70	-1.0
4,517,786	+				+0.5
4,517,787	-				+1.9
4,517,897	+	yfaQ	OKFHMN_23155	0.14	-0.1
4,517,981	+	yfaQ	OKFHMN_23155	0.24	-0.3
4,517,981	+	yfaQ	OKFHMN_23155	0.24	+0.3
4,517,981	+	yfaQ	OKFHMN_23155	0.24	+0.4
4,517,981	+	yfaQ	OKFHMN_23155	0.24	+1.0
4,518,060	-	yfaQ	OKFHMN_23155	0.34	-0.5
4,518,145	+	yfaQ	OKFHMN_23155	0.45	+0.6