Strain Fitness in Escherichia coli ECRC100 around OKFHMN_22955

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,468,394	-	menC	OKFHMN_22950	0.21	-0.7
4,468,453	+	menC	OKFHMN_22950	0.27	+1.3
4,468,454	-	menC	OKFHMN_22950	0.27	+1.7
4,468,562	+	menC	OKFHMN_22950	0.38	+0.5
4,468,562	+	menC	OKFHMN_22950	0.38	-1.9
4,468,603	-	menC	OKFHMN_22950	0.42	-0.4
4,468,603	-	menC	OKFHMN_22950	0.42	-0.1
4,468,888	+	menC	OKFHMN_22950	0.72	-0.3
4,468,999	+	menC	OKFHMN_22950	0.84	-0.8
4,469,000	-	menC	OKFHMN_22950	0.84	+3.2
4,469,000	-	menC	OKFHMN_22950	0.84	-0.7
4,469,074	+				-0.2
4,469,092	+				+0.1
4,469,152	+				+0.7
4,469,272	-				+0.4
4,469,335	+	menE	OKFHMN_22955	0.13	+0.2
4,469,539	+	menE	OKFHMN_22955	0.28	-0.8
4,469,728	+	menE	OKFHMN_22955	0.42	-0.1
4,469,728	+	menE	OKFHMN_22955	0.42	-1.2
4,469,728	+	menE	OKFHMN_22955	0.42	-0.5
4,469,729	-	menE	OKFHMN_22955	0.42	-0.3
4,469,744	+	menE	OKFHMN_22955	0.44	+0.8
4,469,883	+	menE	OKFHMN_22955	0.54	+1.4
4,469,884	-	menE	OKFHMN_22955	0.54	+1.4
4,469,884	-	menE	OKFHMN_22955	0.54	+0.4
4,469,884	-	menE	OKFHMN_22955	0.54	+0.0
4,470,059	-	menE	OKFHMN_22955	0.67	+0.2
4,470,146	+	menE	OKFHMN_22955	0.73	+1.0
4,470,213	+	menE	OKFHMN_22955	0.78	-0.8
4,470,214	-	menE	OKFHMN_22955	0.78	-0.1
4,470,261	+	menE	OKFHMN_22955	0.82	-0.2
4,470,507	-				+0.3
4,470,572	+				-2.9
4,470,614	+				+0.0
4,470,614	+				+2.0
4,470,659	+	pmrD	OKFHMN_22960	0.15	+1.7
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.3
4,470,670	+	pmrD	OKFHMN_22960	0.19	-4.4
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.3
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.7
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.5
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.6
4,470,670	+	pmrD	OKFHMN_22960	0.19	+0.3
4,470,670	+	pmrD	OKFHMN_22960	0.19	-0.3
4,470,671	-	pmrD	OKFHMN_22960	0.20	+0.7
4,470,674	+	pmrD	OKFHMN_22960	0.21	+1.0
4,470,674	+	pmrD	OKFHMN_22960	0.21	-1.5
4,470,674	+	pmrD	OKFHMN_22960	0.21	-1.3
4,470,675	-	pmrD	OKFHMN_22960	0.21	+0.3
4,470,751	+	pmrD	OKFHMN_22960	0.50	-1.5
4,470,782	+	pmrD	OKFHMN_22960	0.61	+0.1
4,470,783	-	pmrD	OKFHMN_22960	0.62	-0.1
4,470,831	+	pmrD	OKFHMN_22960	0.80	+0.5
4,470,833	+	pmrD	OKFHMN_22960	0.81	-0.3
4,470,860	+				+0.1
4,470,860	+				-0.0
4,470,929	-	arnF	OKFHMN_22965	0.13	+0.5
4,470,987	-	arnF	OKFHMN_22965	0.28	+1.8
4,471,014	+	arnF	OKFHMN_22965	0.35	+2.3
4,471,022	-	arnF	OKFHMN_22965	0.37	+0.8
4,471,061	+	arnF	OKFHMN_22965	0.47	-0.1
4,471,062	-	arnF	OKFHMN_22965	0.48	-0.5
4,471,113	-	arnF	OKFHMN_22965	0.61	+0.6
4,471,211	+	arnF	OKFHMN_22965	0.86	+0.1
4,471,212	-	arnF	OKFHMN_22965	0.86	+0.9
4,471,231	+				-0.1
4,471,266	-				+0.3
4,471,300	-	arnE	OKFHMN_22970	0.11	-0.5
4,471,391	-	arnE	OKFHMN_22970	0.38	+0.7