Strain Fitness in Escherichia coli ECRC100 around OKFHMN_22450

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,365,096	+	emrY	OKFHMN_22445	0.54	+1.3
4,365,180	+	emrY	OKFHMN_22445	0.59	+0.8
4,365,249	-	emrY	OKFHMN_22445	0.64	+0.1
4,365,270	-	emrY	OKFHMN_22445	0.65	+0.8
4,365,307	+	emrY	OKFHMN_22445	0.68	-0.5
4,365,422	+	emrY	OKFHMN_22445	0.75	-0.8
4,365,565	-	emrY	OKFHMN_22445	0.84	-1.7
4,365,746	+				-0.7
4,365,823	-				+0.9
4,365,824	+				+0.9
4,365,910	+				+0.7
4,366,038	+				-2.7
4,366,135	+	dsdA	OKFHMN_22450	0.17	-0.5
4,366,135	+	dsdA	OKFHMN_22450	0.17	-0.4
4,366,136	-	dsdA	OKFHMN_22450	0.17	-0.1
4,366,158	-	dsdA	OKFHMN_22450	0.19	-2.6
4,366,307	+	dsdA	OKFHMN_22450	0.30	-1.2
4,366,307	+	dsdA	OKFHMN_22450	0.30	+0.0
4,366,307	+	dsdA	OKFHMN_22450	0.30	+1.0
4,366,368	-	dsdA	OKFHMN_22450	0.34	-1.2
4,366,449	-	dsdA	OKFHMN_22450	0.40	-0.7
4,366,499	-	dsdA	OKFHMN_22450	0.44	+0.1
4,366,595	-	dsdA	OKFHMN_22450	0.51	-1.2
4,366,595	-	dsdA	OKFHMN_22450	0.51	-0.9
4,366,673	+	dsdA	OKFHMN_22450	0.57	-2.2
4,366,673	+	dsdA	OKFHMN_22450	0.57	-0.1
4,366,673	+	dsdA	OKFHMN_22450	0.57	-1.0
4,366,674	-	dsdA	OKFHMN_22450	0.57	-0.8
4,366,674	-	dsdA	OKFHMN_22450	0.57	-0.6
4,366,674	-	dsdA	OKFHMN_22450	0.57	+0.2
4,366,674	-	dsdA	OKFHMN_22450	0.57	+0.0
4,366,674	-	dsdA	OKFHMN_22450	0.57	+0.2
4,366,760	-	dsdA	OKFHMN_22450	0.64	-0.4
4,366,779	-	dsdA	OKFHMN_22450	0.65	+0.2
4,366,805	-	dsdA	OKFHMN_22450	0.67	-0.8
4,366,890	+	dsdA	OKFHMN_22450	0.74	-0.8
4,367,013	-	dsdA	OKFHMN_22450	0.83	-0.8
4,367,057	-	dsdA	OKFHMN_22450	0.86	+0.1
4,367,119	+				+2.0
4,367,120	-				-1.0
4,367,120	-				-0.7
4,367,120	-				-1.7
4,367,125	-				-3.3
4,367,125	-				+0.7
4,367,125	-				-0.0
4,367,157	-				-0.4
4,367,243	+				-0.5
4,367,244	-				-0.1
4,367,260	-				+0.2
4,367,260	-				+0.7
4,367,311	+	dsdX	OKFHMN_22455	0.24	+0.5
4,367,329	-	dsdX	OKFHMN_22455	0.32	-0.3
4,367,486	+				-0.2
4,367,487	-				-0.1
4,367,544	+				-0.0
4,367,545	-				-0.3
4,367,547	-				+0.8
4,367,602	-				-0.7
4,367,619	+				+0.1
4,367,619	+				-0.0
4,367,619	+				-1.3
4,367,620	-				-0.4
4,367,825	+				+0.3
4,367,852	-				-0.5
4,367,896	-	purR	OKFHMN_22460	0.14	-2.3
4,367,896	-	purR	OKFHMN_22460	0.14	+1.3
4,367,955	+	purR	OKFHMN_22460	0.20	-0.4
4,368,085	+	purR	OKFHMN_22460	0.34	-0.4
4,368,085	+	purR	OKFHMN_22460	0.34	-1.4
4,368,085	+	purR	OKFHMN_22460	0.34	+1.1
4,368,086	-	purR	OKFHMN_22460	0.34	-1.4
4,368,091	-	purR	OKFHMN_22460	0.35	+1.0
4,368,130	+	purR	OKFHMN_22460	0.39	-1.1
4,368,187	+	purR	OKFHMN_22460	0.45	-1.5