Strain Fitness in Escherichia coli ECRC100 around OKFHMN_21495

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
4,164,427	+				-1.9
4,164,447	-				+0.1
4,164,517	+				+0.2
4,164,546	+				+0.2
4,164,555	-				-0.4
4,164,567	+				-0.0
4,164,615	-				-1.0
4,164,624	-				+0.1
4,164,673	-				-0.2
4,164,707	-				-0.2
4,164,777	+				+0.8
4,164,778	-				+0.2
4,164,874	+	qseG	OKFHMN_21490	0.23	-0.0
4,164,875	-	qseG	OKFHMN_21490	0.24	-0.1
4,164,875	-	qseG	OKFHMN_21490	0.24	-0.1
4,164,898	+	qseG	OKFHMN_21490	0.27	+0.4
4,164,899	-	qseG	OKFHMN_21490	0.27	+0.3
4,165,193	+	qseG	OKFHMN_21490	0.68	-0.6
4,165,199	-	qseG	OKFHMN_21490	0.69	-0.9
4,165,432	+				+0.0
4,165,432	+				+2.0
4,165,433	-				-1.7
4,165,433	-				-0.2
4,165,564	+	qseF	OKFHMN_21495	0.12	-0.6
4,165,565	-	qseF	OKFHMN_21495	0.12	+2.8
4,165,648	+	qseF	OKFHMN_21495	0.18	+0.6
4,165,748	-	qseF	OKFHMN_21495	0.25	+0.6
4,165,973	+	qseF	OKFHMN_21495	0.42	-0.3
4,165,973	+	qseF	OKFHMN_21495	0.42	-0.3
4,165,974	-	qseF	OKFHMN_21495	0.42	+0.6
4,165,974	-	qseF	OKFHMN_21495	0.42	+1.7
4,165,980	-	qseF	OKFHMN_21495	0.43	-0.8
4,165,983	-	qseF	OKFHMN_21495	0.43	+0.5
4,165,983	-	qseF	OKFHMN_21495	0.43	+1.4
4,165,983	-	qseF	OKFHMN_21495	0.43	-0.2
4,166,196	-	qseF	OKFHMN_21495	0.59	+0.5
4,166,226	-	qseF	OKFHMN_21495	0.61	-0.3
4,166,289	+	qseF	OKFHMN_21495	0.66	-1.7
4,166,289	+	qseF	OKFHMN_21495	0.66	-1.5
4,166,396	+	qseF	OKFHMN_21495	0.74	+1.4
4,166,536	+	qseF	OKFHMN_21495	0.84	+3.0
4,166,540	-	qseF	OKFHMN_21495	0.85	+0.7
4,166,594	+	qseF	OKFHMN_21495	0.89	+0.8
4,166,595	-	qseF	OKFHMN_21495	0.89	+0.7
4,166,696	+				+0.5
4,166,753	+				-0.4
4,166,753	+				-0.7
4,166,753	+				-0.0
4,166,801	+				-0.2
4,166,941	-	glnB	OKFHMN_21500	0.40	-1.3
4,166,955	+	glnB	OKFHMN_21500	0.44	-0.7
4,166,955	+	glnB	OKFHMN_21500	0.44	+0.6
4,166,955	+	glnB	OKFHMN_21500	0.44	+0.3
4,166,956	-	glnB	OKFHMN_21500	0.45	-2.2
4,166,957	+	glnB	OKFHMN_21500	0.45	+1.0
4,166,958	-	glnB	OKFHMN_21500	0.45	+0.4
4,166,958	-	glnB	OKFHMN_21500	0.45	-2.5
4,167,030	-	glnB	OKFHMN_21500	0.66	-2.3
4,167,030	-	glnB	OKFHMN_21500	0.66	-0.1
4,167,035	+	glnB	OKFHMN_21500	0.68	+0.3
4,167,036	-	glnB	OKFHMN_21500	0.68	-1.5
4,167,199	+				-0.7
4,167,220	-				+0.2
4,167,254	+				-1.0
4,167,300	+				-2.5
4,167,301	-				-0.4
4,167,409	-	hmpA	OKFHMN_21505	0.19	-0.1
4,167,454	+	hmpA	OKFHMN_21505	0.22	-0.7
4,167,619	+	hmpA	OKFHMN_21505	0.36	+2.2
4,167,730	-	hmpA	OKFHMN_21505	0.46	+0.3