Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18295

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
3,549,220	-	agaD	OKFHMN_18285	0.80	-1.6
3,549,239	+	agaD	OKFHMN_18285	0.82	-0.3
3,549,241	+	agaD	OKFHMN_18285	0.83	+0.2
3,549,241	+	agaD	OKFHMN_18285	0.83	+0.8
3,549,276	-	agaD	OKFHMN_18285	0.87	-0.6
3,549,306	-				-0.3
3,549,515	+	agaC	OKFHMN_18290	0.23	+0.2
3,549,515	+	agaC	OKFHMN_18290	0.23	-1.2
3,549,516	-	agaC	OKFHMN_18290	0.24	-3.0
3,549,552	+	agaC	OKFHMN_18290	0.29	+0.8
3,549,552	+	agaC	OKFHMN_18290	0.29	-0.7
3,549,553	-	agaC	OKFHMN_18290	0.30	-0.2
3,549,553	-	agaC	OKFHMN_18290	0.30	-0.2
3,549,553	-	agaC	OKFHMN_18290	0.30	+0.1
3,549,554	+	agaC	OKFHMN_18290	0.30	-1.1
3,549,554	+	agaC	OKFHMN_18290	0.30	+0.3
3,549,554	+	agaC	OKFHMN_18290	0.30	-0.8
3,549,555	-	agaC	OKFHMN_18290	0.30	-0.5
3,549,555	-	agaC	OKFHMN_18290	0.30	+0.9
3,549,555	-	agaC	OKFHMN_18290	0.30	+0.7
3,549,555	-	agaC	OKFHMN_18290	0.30	+0.2
3,549,555	-	agaC	OKFHMN_18290	0.30	+0.2
3,549,689	+	agaC	OKFHMN_18290	0.51	+0.1
3,549,689	+	agaC	OKFHMN_18290	0.51	+0.3
3,549,690	-	agaC	OKFHMN_18290	0.51	+0.6
3,549,690	-	agaC	OKFHMN_18290	0.51	-0.0
3,549,693	+	agaC	OKFHMN_18290	0.52	-0.1
3,549,693	+	agaC	OKFHMN_18290	0.52	-0.2
3,549,807	+	agaC	OKFHMN_18290	0.70	+0.8
3,549,811	+	agaC	OKFHMN_18290	0.70	+0.5
3,549,828	-	agaC	OKFHMN_18290	0.73	+0.3
3,549,853	+	agaC	OKFHMN_18290	0.77	+0.5
3,550,055	-				-0.6
3,550,194	-				+0.9
3,550,406	+	agaB	OKFHMN_18295	0.41	-0.6
3,550,475	+	agaB	OKFHMN_18295	0.56	-0.1
3,550,491	-	agaB	OKFHMN_18295	0.59	+1.2
3,550,493	+	agaB	OKFHMN_18295	0.60	-0.3
3,550,533	-	agaB	OKFHMN_18295	0.68	+0.3
3,550,540	-	agaB	OKFHMN_18295	0.69	-0.2
3,550,554	-	agaB	OKFHMN_18295	0.72	+0.7
3,550,585	-	agaB	OKFHMN_18295	0.79	-1.9
3,550,763	+				+0.0
3,550,821	+				-0.1
3,550,854	-				-0.2
3,550,937	+				-0.2
3,550,938	-	kbaY	OKFHMN_18300	0.10	+0.6
3,551,008	+	kbaY	OKFHMN_18300	0.18	+1.1
3,551,050	-	kbaY	OKFHMN_18300	0.23	-0.2
3,551,093	-	kbaY	OKFHMN_18300	0.28	-0.2
3,551,166	-	kbaY	OKFHMN_18300	0.36	+0.4
3,551,232	+	kbaY	OKFHMN_18300	0.44	-0.5
3,551,372	-	kbaY	OKFHMN_18300	0.60	-0.1
3,551,445	+	kbaY	OKFHMN_18300	0.69	+0.4
3,551,525	+	kbaY	OKFHMN_18300	0.78	-0.4
3,551,526	-	kbaY	OKFHMN_18300	0.78	+0.2
3,551,526	-	kbaY	OKFHMN_18300	0.78	-0.1
3,551,526	-	kbaY	OKFHMN_18300	0.78	+0.4
3,551,661	-				+0.7
3,551,683	+				+0.5