Strain Fitness in Escherichia coli ECRC100 around OKFHMN_15340

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,963,446	+	escC	OKFHMN_15330	0.83	+0.5
2,963,775	+	sepD	OKFHMN_15335	0.16	+0.1
2,964,096	+	sepD	OKFHMN_15335	0.86	+0.2
2,964,139	-				+1.7
2,964,158	+				-0.2
2,964,272	+	escJ	OKFHMN_15340	0.19	-0.2
2,964,721	+				+0.4
2,964,878	-	escI	OKFHMN_15345	0.37	+0.3
2,964,878	-	escI	OKFHMN_15345	0.37	-0.1
2,964,878	-	escI	OKFHMN_15345	0.37	-0.8
2,964,982	+	escI	OKFHMN_15345	0.64	+0.2
2,965,038	+	escI	OKFHMN_15345	0.79	-3.3
2,965,160	-				+0.9
2,965,239	-	espZ	OKFHMN_15350	0.13	-2.5
2,965,248	+	espZ	OKFHMN_15350	0.16	-1.0
2,965,279	+	espZ	OKFHMN_15350	0.26	-0.1
2,965,322	+	espZ	OKFHMN_15350	0.41	+0.4
2,965,368	-	espZ	OKFHMN_15350	0.56	-0.1
2,965,540	+				-1.3
2,965,606	+				+1.8
2,965,612	+				+0.5