Strain Fitness in Escherichia coli ECRC100 around OKFHMN_11960

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,292,491	+				+1.6
2,292,603	-	ytfT	OKFHMN_11955	0.15	-1.3
2,292,749	+	ytfT	OKFHMN_11955	0.29	-0.9
2,292,792	-	ytfT	OKFHMN_11955	0.33	-1.4
2,292,792	-	ytfT	OKFHMN_11955	0.33	+1.1
2,292,990	-	ytfT	OKFHMN_11955	0.53	-0.4
2,293,096	-	ytfT	OKFHMN_11955	0.63	-1.5
2,293,259	+	ytfT	OKFHMN_11955	0.79	-0.0
2,293,296	-	ytfT	OKFHMN_11955	0.83	+1.4
2,293,587	-				+0.2
2,293,834	-	ytfR	OKFHMN_11960	0.23	-0.4
2,293,879	+	ytfR	OKFHMN_11960	0.26	-0.1
2,294,293	+	ytfR	OKFHMN_11960	0.54	+1.1
2,294,318	-	ytfR	OKFHMN_11960	0.55	+0.1
2,294,336	-	ytfR	OKFHMN_11960	0.57	-1.2
2,294,363	+	ytfR	OKFHMN_11960	0.58	-0.0
2,294,364	-	ytfR	OKFHMN_11960	0.58	-0.1
2,294,364	-	ytfR	OKFHMN_11960	0.58	-0.2
2,294,440	+	ytfR	OKFHMN_11960	0.63	+0.3
2,294,440	+	ytfR	OKFHMN_11960	0.63	+0.0
2,294,441	-	ytfR	OKFHMN_11960	0.64	-1.6
2,294,674	+	ytfR	OKFHMN_11960	0.79	+0.4
2,294,674	+	ytfR	OKFHMN_11960	0.79	+0.1
2,294,675	-	ytfR	OKFHMN_11960	0.79	+0.3
2,294,679	+	ytfR	OKFHMN_11960	0.79	-2.4
2,294,694	+	ytfR	OKFHMN_11960	0.80	-2.1
2,294,694	+	ytfR	OKFHMN_11960	0.80	+0.2
2,294,695	-	ytfR	OKFHMN_11960	0.80	+0.8
2,294,721	-	ytfR	OKFHMN_11960	0.82	-0.6
2,294,813	+	ytfR	OKFHMN_11960	0.88	-0.7
2,294,815	+	ytfR	OKFHMN_11960	0.88	-0.1
2,294,815	+	ytfR	OKFHMN_11960	0.88	-0.3
2,294,815	+	ytfR	OKFHMN_11960	0.88	+0.3
2,294,815	+	ytfR	OKFHMN_11960	0.88	+0.5
2,294,815	+	ytfR	OKFHMN_11960	0.88	+0.5
2,294,816	-	ytfR	OKFHMN_11960	0.88	+1.5
2,294,915	-				+1.1
2,294,945	-				-0.8
2,295,004	-				+0.0
2,295,029	-				-0.2
2,295,119	+				+0.2
2,295,119	+				+2.1
2,295,120	-				+0.1
2,295,237	+	ytfQ	OKFHMN_11970	0.11	+0.2
2,295,325	-	ytfQ	OKFHMN_11970	0.21	-2.0
2,295,336	-	ytfQ	OKFHMN_11970	0.22	+0.6
2,295,361	+	ytfQ	OKFHMN_11970	0.24	+0.6
2,295,362	-	ytfQ	OKFHMN_11970	0.24	+0.7
2,295,391	+	ytfQ	OKFHMN_11970	0.27	+0.6
2,295,559	+	ytfQ	OKFHMN_11970	0.45	-0.1
2,295,584	-	ytfQ	OKFHMN_11970	0.48	+0.8
2,295,682	+	ytfQ	OKFHMN_11970	0.58	+0.3
2,295,683	-	ytfQ	OKFHMN_11970	0.58	+1.2
2,295,683	-	ytfQ	OKFHMN_11970	0.58	+0.3
2,295,718	+	ytfQ	OKFHMN_11970	0.62	+0.1
2,295,720	+	ytfQ	OKFHMN_11970	0.62	-2.8
2,295,721	-	ytfQ	OKFHMN_11970	0.62	+0.5
2,295,794	+	ytfQ	OKFHMN_11970	0.70	-2.0
2,295,794	+	ytfQ	OKFHMN_11970	0.70	-0.1
2,295,922	+	ytfQ	OKFHMN_11970	0.83	+0.2
2,295,923	-	ytfQ	OKFHMN_11970	0.83	+0.0