Strain Fitness in Escherichia coli ECRC100 around OKFHMN_10685

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,008,720	-	mraZ	OKFHMN_10680	0.49	+0.6
2,008,720	-	mraZ	OKFHMN_10680	0.49	+1.0
2,008,720	-	mraZ	OKFHMN_10680	0.49	-0.0
2,008,720	-	mraZ	OKFHMN_10680	0.49	+0.4
2,008,726	-	mraZ	OKFHMN_10680	0.51	+1.0
2,008,969	-				-3.7
2,009,080	-				+0.4
2,009,101	-				-0.8
2,009,124	-				+0.1
2,009,135	+				+0.3
2,009,136	-				-0.2
2,009,136	-				+1.0
2,009,136	-				+0.5
2,009,203	-				+0.5
2,009,204	+				-0.0
2,009,236	+				+0.4
2,009,243	+				-1.1
2,009,243	+				-1.5
2,009,243	+				+0.3
2,009,243	+				+0.4
2,009,244	-				-0.5
2,009,244	-				+0.1
2,009,244	-				-0.7
2,009,362	-				-2.1
2,009,390	+				+0.5
2,009,390	+				-0.4
2,009,391	-				-0.2
2,009,391	-				-0.5
2,009,394	+				-0.5
2,009,423	-				-0.5
2,009,423	-				+0.4
2,009,446	-				+0.5
2,009,451	+				+0.0
2,009,455	-				+1.5
2,009,555	+				-2.4
2,009,595	+				-2.1
2,009,606	-				-5.4
2,009,714	-	cra	OKFHMN_10685	0.16	-1.0
2,009,772	+	cra	OKFHMN_10685	0.22	-1.1
2,009,773	-	cra	OKFHMN_10685	0.22	-1.3
2,009,773	-	cra	OKFHMN_10685	0.22	-2.9
2,009,900	+	cra	OKFHMN_10685	0.34	-0.6
2,010,034	-	cra	OKFHMN_10685	0.48	-2.6
2,010,037	+	cra	OKFHMN_10685	0.48	-3.8
2,010,038	-	cra	OKFHMN_10685	0.48	-2.7
2,010,038	-	cra	OKFHMN_10685	0.48	+0.5
2,010,038	-	cra	OKFHMN_10685	0.48	-3.0
2,010,091	-	cra	OKFHMN_10685	0.53	-4.8
2,010,091	-	cra	OKFHMN_10685	0.53	-1.8
2,010,091	-	cra	OKFHMN_10685	0.53	-2.4
2,010,318	+	cra	OKFHMN_10685	0.76	-1.1
2,010,332	+	cra	OKFHMN_10685	0.77	-2.1
2,010,369	+	cra	OKFHMN_10685	0.81	-1.8
2,010,498	+				-3.5
2,010,503	+				-0.6
2,010,503	+				-1.8
2,010,503	+				-0.8
2,010,503	+				-1.3
2,010,503	+				-3.2
2,010,503	+				-4.0
2,010,504	-				-0.8
2,010,504	-				-2.9
2,010,504	-				-1.0
2,010,573	+				-1.9
2,010,620	+				+0.1
2,010,627	+				-0.8
2,010,628	-				+0.2
2,010,661	-	fruL	OKFHMN_10690	0.24	-0.8
2,010,661	-	fruL	OKFHMN_10690	0.24	+2.0
2,010,716	-	fruL	OKFHMN_10690	0.87	+0.3
2,010,747	+				+0.3
2,010,747	+				+0.1
2,010,826	-	ilvN	OKFHMN_10695	0.18	-0.9
2,010,826	-	ilvN	OKFHMN_10695	0.18	-0.4
2,010,843	-	ilvN	OKFHMN_10695	0.21	+0.6
2,010,870	-	ilvN	OKFHMN_10695	0.27	-0.8
2,010,871	+	ilvN	OKFHMN_10695	0.27	+0.4
2,010,871	+	ilvN	OKFHMN_10695	0.27	+0.5
2,010,872	-	ilvN	OKFHMN_10695	0.27	+0.2
2,010,927	-	ilvN	OKFHMN_10695	0.38	+0.3
2,011,036	+	ilvN	OKFHMN_10695	0.61	+0.3
2,011,036	+	ilvN	OKFHMN_10695	0.61	+0.4
2,011,037	-	ilvN	OKFHMN_10695	0.61	-0.7
2,011,038	+	ilvN	OKFHMN_10695	0.61	+0.4
2,011,038	+	ilvN	OKFHMN_10695	0.61	-0.2
2,011,039	-	ilvN	OKFHMN_10695	0.61	+0.5
2,011,039	-	ilvN	OKFHMN_10695	0.61	-0.3
2,011,094	+	ilvN	OKFHMN_10695	0.72	+0.3
2,011,101	+	ilvN	OKFHMN_10695	0.74	+0.1
2,011,207	-				-1.1
2,011,215	+				+0.2
2,011,253	+				-0.0
2,011,335	-				+0.3
2,011,349	-				-0.5
2,011,426	-	ilvI	OKFHMN_10700	0.11	+0.2
2,011,455	-	ilvI	OKFHMN_10700	0.13	+0.8
2,011,466	-	ilvI	OKFHMN_10700	0.14	-0.8
2,011,467	+	ilvI	OKFHMN_10700	0.14	+2.6
2,011,467	+	ilvI	OKFHMN_10700	0.14	+0.7
2,011,467	+	ilvI	OKFHMN_10700	0.14	-0.9
2,011,467	+	ilvI	OKFHMN_10700	0.14	+0.7
2,011,468	-	ilvI	OKFHMN_10700	0.14	+0.1
2,011,468	-	ilvI	OKFHMN_10700	0.14	-1.5
2,011,468	-	ilvI	OKFHMN_10700	0.14	+0.8
2,011,468	-	ilvI	OKFHMN_10700	0.14	-0.4
2,011,468	-	ilvI	OKFHMN_10700	0.14	+0.6
2,011,468	-	ilvI	OKFHMN_10700	0.14	-1.2
2,011,468	-	ilvI	OKFHMN_10700	0.14	+0.4
2,011,537	+	ilvI	OKFHMN_10700	0.18	+0.5
2,011,544	-	ilvI	OKFHMN_10700	0.18	+0.3