Strain Fitness in Escherichia coli ECRC100 around OKFHMN_07000

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,250,528	-	nei	OKFHMN_06990	0.75	+0.6
1,250,536	-	nei	OKFHMN_06990	0.76	-0.3
1,250,556	+	nei	OKFHMN_06990	0.79	+0.9
1,250,556	+	nei	OKFHMN_06990	0.79	-1.4
1,250,557	-	nei	OKFHMN_06990	0.79	+1.5
1,250,589	-	nei	OKFHMN_06990	0.83	-0.5
1,250,617	+	nei	OKFHMN_06990	0.86	+0.7
1,250,747	+				-1.7
1,250,761	-				-0.3
1,250,802	-				-0.2
1,251,112	-	pxpA	OKFHMN_06995	0.48	-0.2
1,251,114	-	pxpA	OKFHMN_06995	0.48	-0.2
1,251,165	+	pxpA	OKFHMN_06995	0.55	+0.3
1,251,166	-	pxpA	OKFHMN_06995	0.55	+0.4
1,251,198	-	pxpA	OKFHMN_06995	0.60	+1.5
1,251,243	+	pxpA	OKFHMN_06995	0.66	+0.3
1,251,259	-	pxpA	OKFHMN_06995	0.68	+1.0
1,251,438	-				+0.5
1,251,438	-				-0.4
1,251,510	+				-0.6
1,251,620	+	pxpC	OKFHMN_07000	0.15	-0.8
1,251,620	+	pxpC	OKFHMN_07000	0.15	+1.1
1,251,621	-	pxpC	OKFHMN_07000	0.15	-0.3
1,251,636	-	pxpC	OKFHMN_07000	0.16	+1.2
1,251,645	-	pxpC	OKFHMN_07000	0.17	-1.4
1,251,816	-	pxpC	OKFHMN_07000	0.36	-0.6
1,251,872	-	pxpC	OKFHMN_07000	0.42	+0.2
1,252,167	-	pxpC	OKFHMN_07000	0.73	-0.2
1,252,167	-	pxpC	OKFHMN_07000	0.73	-2.4
1,252,167	-	pxpC	OKFHMN_07000	0.73	-0.3
1,252,316	+	pxpC	OKFHMN_07000	0.89	-0.2
1,252,386	-				-0.3
1,252,388	-				+0.7
1,252,388	-				+0.3
1,252,415	+				-0.6
1,252,460	+				-0.1
1,252,464	-				+1.2
1,252,508	-	pxpB	OKFHMN_07005	0.15	-0.8
1,252,629	-	pxpB	OKFHMN_07005	0.33	+0.1
1,252,909	+	pxpB	OKFHMN_07005	0.76	-0.0
1,252,910	-	pxpB	OKFHMN_07005	0.76	-0.1
1,253,047	-				+0.3
1,253,089	+				+0.2
1,253,090	-				-0.5
1,253,090	-				-1.4
1,253,166	-	ybgI	OKFHMN_07010	0.10	-0.1
1,253,201	-	ybgI	OKFHMN_07010	0.15	+0.1
1,253,375	+	ybgI	OKFHMN_07010	0.39	+0.3