Strain Fitness in Escherichia coli ECRC100 around OKFHMN_06135

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,084,580	+				+0.8
1,084,718	-				+0.4
1,084,816	+	fsa	OKFHMN_06130	0.12	+0.5
1,084,955	+	fsa	OKFHMN_06130	0.33	+0.2
1,085,000	-	fsa	OKFHMN_06130	0.39	+1.6
1,085,023	-	fsa	OKFHMN_06130	0.43	+0.6
1,085,023	-	fsa	OKFHMN_06130	0.43	+0.3
1,085,114	-	fsa	OKFHMN_06130	0.57	-1.1
1,085,168	-	fsa	OKFHMN_06130	0.65	-3.8
1,085,171	-	fsa	OKFHMN_06130	0.65	-0.3
1,085,321	-	fsa	OKFHMN_06130	0.88	-0.6
1,085,435	+				+1.0
1,085,435	+				-2.0
1,085,435	+				-0.7
1,085,436	-				+0.4
1,085,436	-				-0.3
1,085,441	-				+1.8
1,085,531	+				-0.8
1,085,532	-				+0.0
1,085,754	-	ybiY	OKFHMN_06135	0.25	-0.6
1,085,754	-	ybiY	OKFHMN_06135	0.25	+1.4
1,086,052	-	ybiY	OKFHMN_06135	0.58	-0.5
1,086,319	+	ybiY	OKFHMN_06135	0.87	+0.5
1,086,320	-	ybiY	OKFHMN_06135	0.88	+0.1
1,086,323	+	ybiY	OKFHMN_06135	0.88	+0.0
1,086,503	-		OKFHMN_06140	0.12	-1.6
1,086,543	-		OKFHMN_06140	0.19	-0.3
1,086,545	-		OKFHMN_06140	0.19	-0.5
1,086,555	-		OKFHMN_06140	0.21	+0.3
1,086,585	+		OKFHMN_06140	0.27	-1.6
1,086,705	-		OKFHMN_06140	0.48	-0.5
1,086,706	+		OKFHMN_06140	0.48	+0.3
1,087,309	+	pflD	OKFHMN_06145	0.13	-1.8
1,087,309	+	pflD	OKFHMN_06145	0.13	+0.3
1,087,322	-	pflD	OKFHMN_06145	0.14	+0.1
1,087,386	+	pflD	OKFHMN_06145	0.18	-3.6