Strain Fitness in Escherichia coli ECRC62 around BNILDI_22725

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
4,573,676	+	cyoB	BNILDI_22715	0.81	-0.2
4,573,713	+	cyoB	BNILDI_22715	0.83	-0.5
4,573,714	-	cyoB	BNILDI_22715	0.83	-0.5
4,573,804	-	cyoB	BNILDI_22715	0.87	-0.3
4,573,841	+	cyoB	BNILDI_22715	0.89	-1.3
4,573,892	+				-3.3
4,573,972	-				-1.5
4,573,972	-				+2.4
4,573,974	+				-1.3
4,573,974	+				+1.3
4,573,974	+				-0.9
4,573,975	-				-0.4
4,573,975	-				+0.1
4,573,975	-				+1.1
4,574,028	-				-1.2
4,574,031	-				-0.9
4,574,058	+				+0.2
4,574,058	+				-0.4
4,574,059	-				-0.5
4,574,059	-				-0.1
4,574,181	+	cyoC	BNILDI_22720	0.22	-1.2
4,574,185	+	cyoC	BNILDI_22720	0.22	-0.1
4,574,185	+	cyoC	BNILDI_22720	0.22	+0.1
4,574,185	+	cyoC	BNILDI_22720	0.22	-0.0
4,574,186	-	cyoC	BNILDI_22720	0.23	+0.0
4,574,293	+	cyoC	BNILDI_22720	0.40	-0.1
4,574,317	+	cyoC	BNILDI_22720	0.44	+0.2
4,574,508	+	cyoC	BNILDI_22720	0.75	-1.1
4,574,642	-				+0.2
4,574,660	-				-0.3
4,574,660	-				+0.1
4,574,660	-				-0.4
4,574,672	+				-0.6
4,574,868	-	cyoD	BNILDI_22725	0.63	-0.1
4,574,918	-	cyoD	BNILDI_22725	0.78	-1.2
4,574,938	+	cyoD	BNILDI_22725	0.84	-1.1
4,574,954	+	cyoD	BNILDI_22725	0.89	-0.8
4,574,955	-	cyoD	BNILDI_22725	0.89	-0.8
4,574,971	-				-0.1
4,575,017	+				-0.5
4,575,017	+				-0.1
4,575,122	+	cyoE	BNILDI_22730	0.13	-1.3
4,575,123	-	cyoE	BNILDI_22730	0.14	-0.1
4,575,169	+	cyoE	BNILDI_22730	0.19	-0.2
4,575,177	-	cyoE	BNILDI_22730	0.20	-0.0
4,575,295	+	cyoE	BNILDI_22730	0.33	-0.8
4,575,296	-	cyoE	BNILDI_22730	0.33	-0.7
4,575,534	-	cyoE	BNILDI_22730	0.60	-0.2
4,575,557	-	cyoE	BNILDI_22730	0.62	-0.0
4,575,597	+	cyoE	BNILDI_22730	0.67	+1.2
4,575,635	+	cyoE	BNILDI_22730	0.71	-0.2
4,575,695	-	cyoE	BNILDI_22730	0.78	-1.4
4,575,698	+	cyoE	BNILDI_22730	0.78	-1.5
4,575,736	-	cyoE	BNILDI_22730	0.82	-1.5
4,575,739	+	cyoE	BNILDI_22730	0.83	-0.3
4,575,757	+	cyoE	BNILDI_22730	0.85	-0.3
4,575,806	-				-0.3
4,575,869	-				-0.6
4,575,904	+				-0.7
4,575,919	-				-1.3
4,575,919	-				+1.8