Strain Fitness in Escherichia coli ECRC62 around BNILDI_22460

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
4,515,291	+	ybaP	BNILDI_22445	0.70	+0.1
4,515,360	-	ybaP	BNILDI_22445	0.79	+0.3
4,515,373	-	ybaP	BNILDI_22445	0.81	-0.4
4,515,461	-				-1.0
4,515,482	+				-0.7
4,515,482	+				+0.1
4,515,483	-				-2.0
4,515,490	+				-0.9
4,515,577	-				-0.3
4,515,579	+				+0.4
4,515,580	-				+0.8
4,515,582	+				-0.2
4,515,582	+				-1.9
4,515,582	+				+0.3
4,515,582	+				-0.4
4,515,607	+				+0.2
4,515,786	+	ybaK	BNILDI_22455	0.12	-0.6
4,515,786	+	ybaK	BNILDI_22455	0.12	-0.2
4,515,787	-	ybaK	BNILDI_22455	0.12	+0.5
4,515,894	-	ybaK	BNILDI_22455	0.34	+0.6
4,516,103	+	ybaK	BNILDI_22455	0.78	-0.0
4,516,103	+	ybaK	BNILDI_22455	0.78	-0.0
4,516,107	+	ybaK	BNILDI_22455	0.79	+0.2
4,516,277	-				-0.8
4,516,277	-				+0.0
4,516,277	-				+0.3
4,516,277	-				-1.0
4,516,311	-				-1.1
4,516,312	+				+0.1
4,516,313	-				-0.9
4,516,337	+				+0.5
4,516,354	+				+0.2
4,516,368	-				+0.2
4,516,463	+	ushA	BNILDI_22460	0.13	-0.4
4,516,499	+	ushA	BNILDI_22460	0.15	+1.0
4,516,562	-	ushA	BNILDI_22460	0.19	-0.5
4,516,594	+	ushA	BNILDI_22460	0.21	+0.5
4,516,594	+	ushA	BNILDI_22460	0.21	+1.9
4,516,595	-	ushA	BNILDI_22460	0.21	-0.1
4,516,595	-	ushA	BNILDI_22460	0.21	+0.2
4,516,637	+	ushA	BNILDI_22460	0.24	-0.1
4,516,640	-	ushA	BNILDI_22460	0.24	-3.1
4,516,748	+	ushA	BNILDI_22460	0.30	-2.4
4,516,748	+	ushA	BNILDI_22460	0.30	-0.8
4,516,748	+	ushA	BNILDI_22460	0.30	-1.5
4,516,749	-	ushA	BNILDI_22460	0.30	-1.7
4,516,749	-	ushA	BNILDI_22460	0.30	+0.2
4,516,749	-	ushA	BNILDI_22460	0.30	-0.7
4,516,755	+	ushA	BNILDI_22460	0.31	+0.2
4,516,756	-	ushA	BNILDI_22460	0.31	+0.1
4,516,807	-	ushA	BNILDI_22460	0.34	+0.7
4,516,895	-	ushA	BNILDI_22460	0.39	+1.2
4,516,964	-	ushA	BNILDI_22460	0.43	+0.2
4,516,967	+	ushA	BNILDI_22460	0.44	-0.9
4,516,988	+	ushA	BNILDI_22460	0.45	-0.4
4,517,092	+	ushA	BNILDI_22460	0.51	-0.7
4,517,092	+	ushA	BNILDI_22460	0.51	+1.2
4,517,459	+	ushA	BNILDI_22460	0.73	+0.0
4,517,523	+	ushA	BNILDI_22460	0.77	-1.2
4,517,573	-	ushA	BNILDI_22460	0.80	+1.5
4,517,589	-	ushA	BNILDI_22460	0.81	+0.2
4,517,661	+	ushA	BNILDI_22460	0.86	+0.3
4,517,737	+				-1.1
4,517,783	+				-0.6
4,517,796	-				-0.8
4,517,796	-				+0.7
4,517,810	+				-1.2
4,517,821	+				+0.5
4,517,938	+				-1.1
4,517,953	+				-0.1
4,517,954	-				+0.6
4,517,978	+				-0.9
4,517,979	-				-1.5
4,518,040	-				+0.2
4,518,045	+				-0.1
4,518,045	+				+0.2
4,518,045	+				-1.5
4,518,061	+				-1.4
4,518,190	-				+0.7
4,518,194	+				-1.5
4,518,256	+	fsr	BNILDI_22465	0.12	+0.7
4,518,257	-	fsr	BNILDI_22465	0.12	+0.3
4,518,291	+	fsr	BNILDI_22465	0.14	+0.9
4,518,291	+	fsr	BNILDI_22465	0.14	+0.5
4,518,416	+	fsr	BNILDI_22465	0.25	+0.2
4,518,417	-	fsr	BNILDI_22465	0.25	+0.6
4,518,532	-	fsr	BNILDI_22465	0.34	-0.9
4,518,567	+	fsr	BNILDI_22465	0.37	-0.5
4,518,762	+	fsr	BNILDI_22465	0.53	-0.5
4,518,863	-	fsr	BNILDI_22465	0.61	+0.3
4,518,863	-	fsr	BNILDI_22465	0.61	+0.4
4,518,871	+	fsr	BNILDI_22465	0.62	-0.7
4,518,893	+	fsr	BNILDI_22465	0.64	-0.7
4,518,894	-	fsr	BNILDI_22465	0.64	-0.6
4,518,894	-	fsr	BNILDI_22465	0.64	+0.5