Strain Fitness in Escherichia coli ECRC62 around BNILDI_17220

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
3,447,206	-	marA	BNILDI_17210	0.13	+0.1
3,447,206	-	marA	BNILDI_17210	0.13	-0.9
3,447,206	-	marA	BNILDI_17210	0.13	+1.2
3,447,223	+	marA	BNILDI_17210	0.18	+0.2
3,447,223	+	marA	BNILDI_17210	0.18	+0.4
3,447,223	+	marA	BNILDI_17210	0.18	+0.5
3,447,224	-	marA	BNILDI_17210	0.18	-0.8
3,447,244	-	marA	BNILDI_17210	0.23	+0.9
3,447,370	-	marA	BNILDI_17210	0.56	+0.3
3,447,370	-	marA	BNILDI_17210	0.56	-0.3
3,447,424	+	marA	BNILDI_17210	0.70	+0.6
3,447,512	-				-0.9
3,447,524	-				-0.9
3,447,652	-	marR	BNILDI_17215	0.22	+0.8
3,447,652	-	marR	BNILDI_17215	0.22	-0.6
3,447,652	-	marR	BNILDI_17215	0.22	+0.1
3,447,652	-	marR	BNILDI_17215	0.22	-0.1
3,447,831	-	marR	BNILDI_17215	0.63	-0.2
3,447,831	-	marR	BNILDI_17215	0.63	-0.3
3,447,864	-	marR	BNILDI_17215	0.70	+1.9
3,447,899	-	marR	BNILDI_17215	0.78	-1.2
3,447,943	-	marR	BNILDI_17215	0.89	+0.3
3,448,162	-				+1.0
3,448,183	+				+1.6
3,448,192	+				+1.6
3,448,323	+	marC	BNILDI_17220	0.18	+0.5
3,448,355	+	marC	BNILDI_17220	0.23	-0.2
3,448,356	-	marC	BNILDI_17220	0.23	+3.9
3,448,356	-	marC	BNILDI_17220	0.23	-1.9
3,448,379	-	marC	BNILDI_17220	0.26	-0.4
3,448,620	+	marC	BNILDI_17220	0.62	+0.2
3,448,620	+	marC	BNILDI_17220	0.62	+0.2
3,448,711	-	marC	BNILDI_17220	0.76	-0.0
3,448,746	+	marC	BNILDI_17220	0.81	-0.5
3,448,808	+				-0.2
3,448,809	-				-0.2
3,448,812	+				-0.2
3,448,812	+				+1.6
3,448,813	-				+0.9
3,448,813	-				-0.4
3,448,813	-				+0.0
3,448,813	-				+1.0
3,448,813	-				+0.9
3,448,827	+				+0.2
3,448,854	+				-0.7
3,448,861	+				+0.0
3,448,867	+				-0.6
3,448,895	+				+2.0
3,449,030	-	ydeA	BNILDI_17225	0.11	+0.7
3,449,030	-	ydeA	BNILDI_17225	0.11	+0.3
3,449,056	-	ydeA	BNILDI_17225	0.14	+0.1
3,449,059	-	ydeA	BNILDI_17225	0.14	-0.2
3,449,059	-	ydeA	BNILDI_17225	0.14	-1.3
3,449,130	+	ydeA	BNILDI_17225	0.20	+1.0
3,449,188	+	ydeA	BNILDI_17225	0.25	-0.1
3,449,326	+	ydeA	BNILDI_17225	0.36	+0.6
3,449,327	-	ydeA	BNILDI_17225	0.36	+0.0
3,449,393	+	ydeA	BNILDI_17225	0.42	+0.9
3,449,393	+	ydeA	BNILDI_17225	0.42	-0.7
3,449,394	-	ydeA	BNILDI_17225	0.42	-0.9
3,449,394	-	ydeA	BNILDI_17225	0.42	+0.2
3,449,394	-	ydeA	BNILDI_17225	0.42	+0.8
3,449,399	+	ydeA	BNILDI_17225	0.42	+0.2
3,449,399	+	ydeA	BNILDI_17225	0.42	-0.6
3,449,400	-	ydeA	BNILDI_17225	0.42	-0.7
3,449,400	-	ydeA	BNILDI_17225	0.42	-0.1
3,449,530	-	ydeA	BNILDI_17225	0.53	-0.7
3,449,562	+	ydeA	BNILDI_17225	0.56	+0.1
3,449,598	-	ydeA	BNILDI_17225	0.59	-0.1
3,449,598	-	ydeA	BNILDI_17225	0.59	+0.0
3,449,623	+	ydeA	BNILDI_17225	0.61	-0.4
3,449,623	+	ydeA	BNILDI_17225	0.61	-2.3
3,449,624	-	ydeA	BNILDI_17225	0.61	+1.7
3,449,662	+	ydeA	BNILDI_17225	0.64	-0.3
3,449,662	+	ydeA	BNILDI_17225	0.64	-0.2
3,449,700	+	ydeA	BNILDI_17225	0.68	-0.1
3,449,806	+	ydeA	BNILDI_17225	0.77	-0.7
3,449,846	-	ydeA	BNILDI_17225	0.80	+0.5
3,449,846	-	ydeA	BNILDI_17225	0.80	+0.6