Strain Fitness in Escherichia coli ECRC62 around BNILDI_10025

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,010,982	+	ygfX	BNILDI_10015	0.20	-0.6
2,010,988	-	ygfX	BNILDI_10015	0.22	+0.8
2,010,988	-	ygfX	BNILDI_10015	0.22	-0.1
2,011,011	-	ygfX	BNILDI_10015	0.27	+0.8
2,011,076	-	ygfX	BNILDI_10015	0.43	-1.7
2,011,078	+	ygfX	BNILDI_10015	0.44	+0.8
2,011,078	+	ygfX	BNILDI_10015	0.44	-0.1
2,011,172	-	ygfX	BNILDI_10015	0.67	-2.1
2,011,172	-	ygfX	BNILDI_10015	0.67	+1.0
2,011,194	+	ygfX	BNILDI_10015	0.72	-0.0
2,011,194	+	ygfX	BNILDI_10015	0.72	+0.5
2,011,224	+	ygfX	BNILDI_10015	0.80	-0.7
2,011,224	+	ygfX	BNILDI_10015	0.80	-1.9
2,011,225	-	ygfX	BNILDI_10015	0.80	-0.8
2,011,323	+				+0.1
2,011,324	-				+0.2
2,011,353	+				-0.1
2,011,353	+				+1.1
2,011,399	+	fldB	BNILDI_10020	0.10	-0.5
2,011,400	-	fldB	BNILDI_10020	0.10	-0.9
2,011,427	-	fldB	BNILDI_10020	0.16	-0.7
2,011,731	+	fldB	BNILDI_10020	0.74	-0.7
2,011,732	-	fldB	BNILDI_10020	0.74	-2.1
2,011,742	+	fldB	BNILDI_10020	0.76	-0.5
2,011,772	+	fldB	BNILDI_10020	0.82	-0.6
2,011,772	+	fldB	BNILDI_10020	0.82	-1.5
2,011,772	+	fldB	BNILDI_10020	0.82	+0.1
2,011,772	+	fldB	BNILDI_10020	0.82	-0.1
2,011,772	+	fldB	BNILDI_10020	0.82	-0.7
2,011,773	-	fldB	BNILDI_10020	0.82	-1.9
2,011,796	-	fldB	BNILDI_10020	0.86	-0.4
2,011,831	-				-0.6
2,011,861	+				-0.3
2,011,905	+				+1.1
2,011,906	-				-1.5
2,011,910	+				-0.3
2,011,924	+				+0.2
2,011,946	-				+0.6
2,011,967	+				+0.2
2,012,050	+				+1.4
2,012,405	+	xerD	BNILDI_10025	0.47	-0.2
2,012,405	+	xerD	BNILDI_10025	0.47	-0.3
2,012,406	-	xerD	BNILDI_10025	0.48	+0.7
2,012,406	-	xerD	BNILDI_10025	0.48	-1.2
2,012,406	-	xerD	BNILDI_10025	0.48	-1.1
2,012,739	+	xerD	BNILDI_10025	0.85	-2.8
2,012,914	+				+0.6
2,012,914	+				+1.1
2,012,915	-				-0.6
2,012,915	-				-0.1
2,013,071	+	dsbC	BNILDI_10030	0.24	-0.3
2,013,072	-	dsbC	BNILDI_10030	0.24	+0.8
2,013,072	-	dsbC	BNILDI_10030	0.24	+0.5
2,013,094	+	dsbC	BNILDI_10030	0.27	-0.6
2,013,095	-	dsbC	BNILDI_10030	0.27	+0.1
2,013,095	-	dsbC	BNILDI_10030	0.27	-0.1
2,013,113	+	dsbC	BNILDI_10030	0.30	+0.1
2,013,113	+	dsbC	BNILDI_10030	0.30	-0.2
2,013,114	-	dsbC	BNILDI_10030	0.30	+0.0
2,013,244	+	dsbC	BNILDI_10030	0.48	-0.2
2,013,245	-	dsbC	BNILDI_10030	0.49	-0.3
2,013,247	+	dsbC	BNILDI_10030	0.49	-0.4
2,013,248	-	dsbC	BNILDI_10030	0.49	-0.1
2,013,292	+	dsbC	BNILDI_10030	0.55	+0.2
2,013,373	+	dsbC	BNILDI_10030	0.67	-0.2
2,013,424	+	dsbC	BNILDI_10030	0.74	+0.5
2,013,425	-	dsbC	BNILDI_10030	0.74	+0.3
2,013,457	+	dsbC	BNILDI_10030	0.78	+1.0
2,013,630	-				-0.3
2,013,757	-				+0.1
2,013,757	-				+0.9
2,013,808	+	recJ	BNILDI_10035	0.11	-0.2
2,013,808	+	recJ	BNILDI_10035	0.11	+0.2