Strain Fitness in Escherichia coli ECRC62 around BNILDI_08385

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,673,870	+				-1.0
1,673,870	+				-0.4
1,674,017	+	fixB	BNILDI_08380	0.15	-0.0
1,674,035	-	fixB	BNILDI_08380	0.17	+0.3
1,674,092	+	fixB	BNILDI_08380	0.23	-0.6
1,674,194	+	fixB	BNILDI_08380	0.34	-0.5
1,674,597	+	fixB	BNILDI_08380	0.77	+0.7
1,674,598	-	fixB	BNILDI_08380	0.77	-0.7
1,674,598	-	fixB	BNILDI_08380	0.77	-0.1
1,674,598	-	fixB	BNILDI_08380	0.77	-0.2
1,674,637	-	fixB	BNILDI_08380	0.81	+0.2
1,674,637	-	fixB	BNILDI_08380	0.81	-0.1
1,674,713	+	fixB	BNILDI_08380	0.89	+0.4
1,674,713	+	fixB	BNILDI_08380	0.89	+0.4
1,674,741	+				-1.2
1,674,802	+				-0.1
1,674,862	+				-0.4
1,674,862	+				-0.2
1,674,863	-				+0.1
1,674,958	-				-0.8
1,674,958	-				-0.2
1,675,036	+	fixX	BNILDI_08385	0.13	+0.8
1,675,170	-	fixX	BNILDI_08385	0.24	+0.2
1,675,170	-	fixX	BNILDI_08385	0.24	-0.5
1,675,237	-	fixX	BNILDI_08385	0.29	-0.3
1,675,240	+	fixX	BNILDI_08385	0.29	+0.6
1,675,293	+	fixX	BNILDI_08385	0.33	-0.1
1,675,294	-	fixX	BNILDI_08385	0.33	-0.4
1,675,541	+	fixX	BNILDI_08385	0.53	-0.4
1,675,542	-	fixX	BNILDI_08385	0.53	-0.1
1,675,543	+	fixX	BNILDI_08385	0.53	-0.5
1,675,543	+	fixX	BNILDI_08385	0.53	-0.6
1,675,544	-	fixX	BNILDI_08385	0.53	+0.1
1,675,544	-	fixX	BNILDI_08385	0.53	-0.2
1,675,702	-	fixX	BNILDI_08385	0.65	+0.5
1,675,783	+	fixX	BNILDI_08385	0.71	+0.3
1,675,784	-	fixX	BNILDI_08385	0.72	-0.4
1,675,950	-	fixX	BNILDI_08385	0.84	+0.0
1,675,959	+	fixX	BNILDI_08385	0.85	-0.1
1,676,090	-				-0.3
1,676,113	-				-0.0
1,676,113	-				+0.1
1,676,287	+	fixX	BNILDI_08390	0.49	+1.1
1,676,445	+				+0.4
1,676,446	-				-0.6
1,676,446	-				+0.2
1,676,584	+				+1.3
1,676,584	+				+0.3
1,676,584	+				+1.1
1,676,585	-				+1.2
1,676,589	-				-1.0
1,676,589	-				+0.2
1,676,714	-	yaaU	BNILDI_08395	0.17	-0.8
1,676,715	+	yaaU	BNILDI_08395	0.17	-1.2
1,676,757	+	yaaU	BNILDI_08395	0.20	-0.6
1,676,758	-	yaaU	BNILDI_08395	0.20	+0.5
1,676,986	+	yaaU	BNILDI_08395	0.37	-0.7
1,676,987	-	yaaU	BNILDI_08395	0.37	-0.1
1,676,987	-	yaaU	BNILDI_08395	0.37	-0.5
1,677,089	+	yaaU	BNILDI_08395	0.45	+0.0
1,677,107	+	yaaU	BNILDI_08395	0.46	+0.1
1,677,131	+	yaaU	BNILDI_08395	0.48	-0.1