Strain Fitness in Escherichia coli ECRC62 around BNILDI_08080

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,612,292	+	radA	BNILDI_08075	0.38	-0.3
1,612,293	-	radA	BNILDI_08075	0.38	+1.2
1,612,317	+	radA	BNILDI_08075	0.40	+0.1
1,612,328	+	radA	BNILDI_08075	0.40	-0.4
1,612,329	-	radA	BNILDI_08075	0.40	-1.0
1,612,376	-	radA	BNILDI_08075	0.44	+0.2
1,612,376	-	radA	BNILDI_08075	0.44	+0.3
1,612,431	-	radA	BNILDI_08075	0.48	+0.7
1,612,476	+	radA	BNILDI_08075	0.51	-0.1
1,612,540	-	radA	BNILDI_08075	0.56	-1.0
1,612,841	+	radA	BNILDI_08075	0.78	-0.3
1,612,841	+	radA	BNILDI_08075	0.78	-0.1
1,612,842	-	radA	BNILDI_08075	0.78	-0.8
1,612,842	-	radA	BNILDI_08075	0.78	-1.0
1,612,892	+	radA	BNILDI_08075	0.81	-0.3
1,613,070	-				+0.2
1,613,147	+				-1.4
1,613,148	-				-0.3
1,613,149	+				-1.4
1,613,150	-				+0.2
1,613,150	-				-0.5
1,613,150	-				-0.5
1,613,150	-				+0.5
1,613,171	+				-2.0
1,613,171	+				-0.2
1,613,171	+				+0.9
1,613,171	+				+0.6
1,613,172	-				-0.7
1,613,172	-				-0.1
1,613,172	-				+0.2
1,613,172	-				-2.2
1,613,172	-				-0.4
1,613,172	-				+0.2
1,613,263	-				+0.5
1,613,266	+				-0.5
1,613,266	+				-0.1
1,613,267	-				-0.5
1,613,267	-				+1.1
1,613,267	-				+0.5
1,613,267	-				-1.0
1,613,377	+	nadR	BNILDI_08080	0.17	+0.1
1,613,378	-	nadR	BNILDI_08080	0.17	+1.9
1,613,411	+	nadR	BNILDI_08080	0.19	+0.3
1,613,411	+	nadR	BNILDI_08080	0.19	+0.1
1,613,411	+	nadR	BNILDI_08080	0.19	+0.8
1,613,411	+	nadR	BNILDI_08080	0.19	+0.7
1,613,411	+	nadR	BNILDI_08080	0.19	+1.0
1,613,411	+	nadR	BNILDI_08080	0.19	-0.1
1,613,412	-	nadR	BNILDI_08080	0.19	+0.1
1,613,412	-	nadR	BNILDI_08080	0.19	+1.1
1,613,412	-	nadR	BNILDI_08080	0.19	-0.3
1,613,412	-	nadR	BNILDI_08080	0.19	-2.0
1,613,416	-	nadR	BNILDI_08080	0.20	-1.0
1,613,416	-	nadR	BNILDI_08080	0.20	+0.3
1,613,457	-	nadR	BNILDI_08080	0.23	+0.9
1,613,457	-	nadR	BNILDI_08080	0.23	+0.3
1,613,554	+	nadR	BNILDI_08080	0.31	+0.8
1,613,727	+	nadR	BNILDI_08080	0.45	+0.4
1,613,727	+	nadR	BNILDI_08080	0.45	-0.2
1,613,727	+	nadR	BNILDI_08080	0.45	-0.1
1,613,727	+	nadR	BNILDI_08080	0.45	-0.5
1,613,727	+	nadR	BNILDI_08080	0.45	-0.4
1,613,728	-	nadR	BNILDI_08080	0.45	+0.6
1,613,729	+	nadR	BNILDI_08080	0.45	-0.6
1,613,730	-	nadR	BNILDI_08080	0.45	+0.1
1,613,751	-	nadR	BNILDI_08080	0.47	-2.1
1,613,774	+	nadR	BNILDI_08080	0.49	+1.6
1,613,780	+	nadR	BNILDI_08080	0.49	-0.8
1,613,834	+	nadR	BNILDI_08080	0.54	+0.1
1,613,834	+	nadR	BNILDI_08080	0.54	-0.6
1,613,835	-	nadR	BNILDI_08080	0.54	+0.6
1,613,864	-	nadR	BNILDI_08080	0.56	+0.4
1,613,864	-	nadR	BNILDI_08080	0.56	-0.2
1,613,868	-	nadR	BNILDI_08080	0.56	-0.4
1,613,900	+	nadR	BNILDI_08080	0.59	-0.4
1,613,930	+	nadR	BNILDI_08080	0.61	+1.4
1,613,971	-	nadR	BNILDI_08080	0.65	-0.2
1,613,971	-	nadR	BNILDI_08080	0.65	+0.1
1,614,161	-	nadR	BNILDI_08080	0.80	-0.2
1,614,342	+				-0.8
1,614,432	+				-0.3
1,614,434	+				-0.4
1,614,434	+				-0.0
1,614,435	-				+0.4
1,614,542	-				-1.6
1,614,542	-				+0.2
1,614,542	-				-1.1
1,614,553	-				-0.6
1,614,712	+				-0.4
1,614,730	+				+1.4
1,614,730	+				+0.1
1,614,731	-				+0.6
1,614,771	-				-0.0
1,614,781	+				+0.5
1,614,804	-				-1.1
1,614,825	-				-0.0
1,614,825	-				-0.5
1,615,086	-	ettA	BNILDI_08090	0.22	-1.3
1,615,100	-	ettA	BNILDI_08090	0.23	-0.5
1,615,136	+	ettA	BNILDI_08090	0.25	-2.7
1,615,136	+	ettA	BNILDI_08090	0.25	+0.2
1,615,137	-	ettA	BNILDI_08090	0.26	+0.1
1,615,139	+	ettA	BNILDI_08090	0.26	+1.6
1,615,139	+	ettA	BNILDI_08090	0.26	+0.1