Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gsiA and iaaA overlap by 14 nucleotides iaaA and moeA are separated by 203 nucleotides
BNILDI_20735: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 4,173,710 to 4,175,581
gsiA
BNILDI_20740: iaaA - beta-aspartyl-peptidase, at 4,175,568 to 4,176,533
iaaA
BNILDI_20745: moeA - molybdopterin molybdotransferase MoeA, at 4,176,737 to 4,177,972
moeA
Position (kb) 4175
4176
4177 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4174.854 kb on + strand, within gsiA at 4174.855 kb on - strand, within gsiA at 4175.123 kb on + strand, within gsiA at 4175.219 kb on - strand, within gsiA at 4175.219 kb on - strand, within gsiA at 4175.223 kb on - strand, within gsiA at 4175.363 kb on + strand, within gsiA at 4175.363 kb on + strand, within gsiA at 4175.364 kb on - strand, within gsiA at 4175.364 kb on - strand, within gsiA at 4175.364 kb on - strand, within gsiA at 4175.364 kb on - strand, within gsiA at 4175.366 kb on + strand, within gsiA at 4175.516 kb on - strand at 4175.602 kb on + strand at 4175.602 kb on + strand at 4175.621 kb on + strand at 4175.647 kb on + strand at 4175.648 kb on - strand at 4175.648 kb on - strand at 4175.648 kb on - strand at 4175.746 kb on - strand, within iaaA at 4175.772 kb on + strand, within iaaA at 4175.806 kb on + strand, within iaaA at 4175.807 kb on - strand, within iaaA at 4175.927 kb on + strand, within iaaA at 4176.075 kb on + strand, within iaaA at 4176.266 kb on + strand, within iaaA at 4176.456 kb on + strand at 4176.534 kb on - strand at 4176.536 kb on + strand at 4176.614 kb on + strand at 4176.615 kb on - strand at 4176.616 kb on + strand at 4176.617 kb on - strand at 4176.637 kb on + strand at 4176.638 kb on - strand at 4176.638 kb on - strand at 4176.672 kb on + strand at 4176.673 kb on - strand at 4176.697 kb on + strand at 4176.697 kb on + strand at 4176.697 kb on + strand at 4176.697 kb on + strand at 4176.697 kb on + strand at 4176.698 kb on - strand at 4176.698 kb on - strand at 4176.701 kb on - strand at 4176.701 kb on - strand at 4176.701 kb on - strand at 4176.834 kb on + strand at 4176.834 kb on + strand at 4176.851 kb on - strand at 4177.015 kb on + strand, within moeA at 4177.163 kb on - strand, within moeA at 4177.395 kb on + strand, within moeA at 4177.395 kb on + strand, within moeA at 4177.395 kb on + strand, within moeA at 4177.396 kb on - strand, within moeA
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,174,854 + gsiA BNILDI_20735 0.61 +1.0 4,174,855 - gsiA BNILDI_20735 0.61 +0.1 4,175,123 + gsiA BNILDI_20735 0.75 -0.1 4,175,219 - gsiA BNILDI_20735 0.81 +0.3 4,175,219 - gsiA BNILDI_20735 0.81 +0.3 4,175,223 - gsiA BNILDI_20735 0.81 +0.2 4,175,363 + gsiA BNILDI_20735 0.88 -0.0 4,175,363 + gsiA BNILDI_20735 0.88 +0.1 4,175,364 - gsiA BNILDI_20735 0.88 +0.3 4,175,364 - gsiA BNILDI_20735 0.88 -0.5 4,175,364 - gsiA BNILDI_20735 0.88 -0.6 4,175,364 - gsiA BNILDI_20735 0.88 +0.4 4,175,366 + gsiA BNILDI_20735 0.88 -0.1 4,175,516 - -0.1 4,175,602 + -0.0 4,175,602 + +0.2 4,175,621 + -0.3 4,175,647 + -1.9 4,175,648 - -0.1 4,175,648 - -0.5 4,175,648 - -0.5 4,175,746 - iaaA BNILDI_20740 0.18 +0.5 4,175,772 + iaaA BNILDI_20740 0.21 -0.8 4,175,806 + iaaA BNILDI_20740 0.25 -0.4 4,175,807 - iaaA BNILDI_20740 0.25 -0.7 4,175,927 + iaaA BNILDI_20740 0.37 -1.8 4,176,075 + iaaA BNILDI_20740 0.52 +0.6 4,176,266 + iaaA BNILDI_20740 0.72 +0.1 4,176,456 + +0.0 4,176,534 - -0.1 4,176,536 + +0.5 4,176,614 + -0.8 4,176,615 - -0.4 4,176,616 + +0.8 4,176,617 - +0.0 4,176,637 + -0.2 4,176,638 - +0.6 4,176,638 - +0.2 4,176,672 + -1.5 4,176,673 - +0.3 4,176,697 + +0.5 4,176,697 + -0.5 4,176,697 + -1.1 4,176,697 + +1.2 4,176,697 + -0.2 4,176,698 - +0.7 4,176,698 - +0.5 4,176,701 - -1.0 4,176,701 - -1.2 4,176,701 - -0.7 4,176,834 + +0.1 4,176,834 + +0.3 4,176,851 - +2.1 4,177,015 + moeA BNILDI_20745 0.22 +0.0 4,177,163 - moeA BNILDI_20745 0.34 -0.9 4,177,395 + moeA BNILDI_20745 0.53 +0.6 4,177,395 + moeA BNILDI_20745 0.53 +1.1 4,177,395 + moeA BNILDI_20745 0.53 +0.2 4,177,396 - moeA BNILDI_20745 0.53 -0.2
Or see this region's nucleotide sequence