Strain Fitness in Escherichia coli ECRC62 around BNILDI_15635

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,141,519	-	pyk	BNILDI_15630	0.40	+0.7
3,141,654	+	pyk	BNILDI_15630	0.49	+0.3
3,141,776	-	pyk	BNILDI_15630	0.57	+0.3
3,141,776	-	pyk	BNILDI_15630	0.57	+0.9
3,141,818	-	pyk	BNILDI_15630	0.60	-0.3
3,141,822	+	pyk	BNILDI_15630	0.60	-0.5
3,141,908	+	pyk	BNILDI_15630	0.66	+0.3
3,141,914	+	pyk	BNILDI_15630	0.67	-0.3
3,141,979	-	pyk	BNILDI_15630	0.71	-0.0
3,142,283	+				-0.1
3,142,284	-				-0.2
3,142,287	+				+0.2
3,142,326	-				-0.3
3,142,393	+				-0.5
3,142,394	-				-0.1
3,142,394	-				-0.3
3,142,473	-				+0.4
3,142,491	+				-0.3
3,142,493	+				+0.2
3,142,539	+				+0.0
3,142,539	+				-0.3
3,142,539	+				+0.2
3,142,539	+				+0.1
3,142,539	+				+0.3
3,142,597	-				+1.2
3,142,648	+	hexR	BNILDI_15635	0.15	-1.9
3,142,649	-	hexR	BNILDI_15635	0.15	-0.1
3,142,686	+	hexR	BNILDI_15635	0.19	+0.1
3,142,688	+	hexR	BNILDI_15635	0.19	-0.2
3,142,688	+	hexR	BNILDI_15635	0.19	-0.3
3,142,688	+	hexR	BNILDI_15635	0.19	-0.2
3,142,689	-	hexR	BNILDI_15635	0.20	+0.0
3,142,719	+	hexR	BNILDI_15635	0.23	+1.0
3,142,720	-	hexR	BNILDI_15635	0.23	-0.0
3,142,870	-	hexR	BNILDI_15635	0.40	+0.6
3,142,878	+	hexR	BNILDI_15635	0.41	+0.1
3,142,879	-	hexR	BNILDI_15635	0.41	-1.4
3,142,879	-	hexR	BNILDI_15635	0.41	-0.7
3,142,929	+	hexR	BNILDI_15635	0.47	-0.5
3,142,930	-	hexR	BNILDI_15635	0.47	-0.5
3,142,944	+	hexR	BNILDI_15635	0.49	+0.1
3,142,944	+	hexR	BNILDI_15635	0.49	-0.3
3,142,944	+	hexR	BNILDI_15635	0.49	+0.3
3,142,944	+	hexR	BNILDI_15635	0.49	-0.1
3,142,945	-	hexR	BNILDI_15635	0.49	+0.3
3,143,047	-	hexR	BNILDI_15635	0.61	+0.4
3,143,109	-	hexR	BNILDI_15635	0.68	-0.4
3,143,109	-	hexR	BNILDI_15635	0.68	-0.5
3,143,150	+	hexR	BNILDI_15635	0.73	-0.3
3,143,280	+	hexR	BNILDI_15635	0.87	-0.3
3,143,457	+				+0.9
3,143,461	-				-1.3
3,143,665	+				+3.1
3,143,680	+				+0.2
3,143,680	+				+0.0
3,143,692	+				-0.4
3,143,704	+				-3.4
3,143,708	+				+0.9
3,143,709	-				-0.4
3,143,959	-	zwf	BNILDI_15640	0.16	-0.8
3,143,992	+	zwf	BNILDI_15640	0.18	-0.5
3,144,257	+	zwf	BNILDI_15640	0.36	-1.2