Strain Fitness in Erwinia amylovora T8 around OLJFJH_17380

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2
3,667,954	+		OLJFJH_17375	0.66	-2.3
3,668,315	+		OLJFJH_17375	0.81	+0.8
3,668,316	-		OLJFJH_17375	0.81	-0.1
3,668,357	-		OLJFJH_17375	0.83	+1.0
3,668,394	+		OLJFJH_17375	0.85	+0.5
3,668,427	+		OLJFJH_17375	0.86	+1.4
3,668,441	+		OLJFJH_17375	0.87	-0.8
3,668,563	+				+0.5
3,668,563	+				-0.8
3,668,564	-				-0.7
3,668,638	+				-0.1
3,668,638	+				+0.6
3,668,638	+				-0.4
3,668,638	+				-0.1
3,668,638	+				-0.0
3,668,639	-				-1.1
3,668,682	+				-1.9
3,668,689	+				-1.2
3,668,690	-				-1.7
3,668,690	-				-0.0
3,668,690	-				-1.4
3,668,690	-				-0.3
3,668,691	+				+0.0
3,668,691	+				+0.5
3,668,691	+				-0.9
3,668,691	+				-0.6
3,668,691	+				+0.6
3,668,691	+				-0.3
3,668,691	+				+0.2
3,668,691	+				-0.8
3,668,692	-				-0.8
3,668,692	-				-0.2
3,668,712	+				-1.1
3,668,713	-				+0.1
3,668,747	+				-1.5
3,668,751	-				-0.8
3,668,751	-				-0.6
3,668,756	+				-1.4
3,668,756	+				-0.1
3,668,756	+				+0.2
3,668,756	+				-0.3
3,668,756	+				-0.2
3,668,756	+				-0.1
3,668,757	-				+0.1
3,668,824	-				-0.1
3,668,833	+				-0.3
3,668,834	-				-1.0
3,668,934	-				+0.6
3,668,934	-				-0.4
3,669,117	+				-0.7
3,669,118	-				+1.8
3,669,119	+				-0.2
3,669,119	+				+0.2
3,669,168	+		OLJFJH_17380	0.12	-0.1
3,669,171	-		OLJFJH_17380	0.12	-1.0
3,669,213	-		OLJFJH_17380	0.14	-0.7
3,669,227	+		OLJFJH_17380	0.15	-0.5
3,669,286	+		OLJFJH_17380	0.18	-0.5
3,669,286	+		OLJFJH_17380	0.18	-0.3
3,669,529	+		OLJFJH_17380	0.30	+0.3
3,669,529	+		OLJFJH_17380	0.30	-1.0
3,669,529	+		OLJFJH_17380	0.30	-0.5
3,669,529	+		OLJFJH_17380	0.30	+0.4
3,669,530	-		OLJFJH_17380	0.30	+1.7
3,669,530	-		OLJFJH_17380	0.30	-0.2
3,669,530	-		OLJFJH_17380	0.30	+1.2
3,669,534	+		OLJFJH_17380	0.30	-0.2
3,669,553	+		OLJFJH_17380	0.31	-0.2
3,669,647	+		OLJFJH_17380	0.36	+1.4
3,669,749	+		OLJFJH_17380	0.41	+0.4
3,669,750	-		OLJFJH_17380	0.41	+0.9
3,669,750	-		OLJFJH_17380	0.41	+0.0
3,669,839	+		OLJFJH_17380	0.45	+2.4
3,669,873	+		OLJFJH_17380	0.47	+0.2
3,669,916	+		OLJFJH_17380	0.49	-1.7
3,669,917	-		OLJFJH_17380	0.49	+2.0
3,669,926	+		OLJFJH_17380	0.49	+0.1
3,669,926	+		OLJFJH_17380	0.49	-0.6
3,669,926	+		OLJFJH_17380	0.49	-1.1
3,669,927	-		OLJFJH_17380	0.49	-0.5
3,669,927	-		OLJFJH_17380	0.49	-0.5
3,669,965	+		OLJFJH_17380	0.51	-0.7
3,670,029	+		OLJFJH_17380	0.54	-0.0
3,670,029	+		OLJFJH_17380	0.54	-0.6
3,670,044	-		OLJFJH_17380	0.55	+1.2
3,670,272	-		OLJFJH_17380	0.66	-0.1
3,670,448	+		OLJFJH_17380	0.75	-0.3
3,670,448	+		OLJFJH_17380	0.75	-0.5
3,670,448	+		OLJFJH_17380	0.75	+0.1
3,670,448	+		OLJFJH_17380	0.75	+4.0
3,670,448	+		OLJFJH_17380	0.75	-0.2
3,670,449	-		OLJFJH_17380	0.75	-0.2
3,670,498	-		OLJFJH_17380	0.78	+1.0
3,670,532	+		OLJFJH_17380	0.79	-0.1
3,670,533	-		OLJFJH_17380	0.79	+1.0
3,670,533	-		OLJFJH_17380	0.79	-0.2
3,670,533	-		OLJFJH_17380	0.79	+0.5
3,670,552	-		OLJFJH_17380	0.80	+0.2
3,670,623	-		OLJFJH_17380	0.84	+1.0
3,670,698	+		OLJFJH_17380	0.87	+0.6
3,670,721	+		OLJFJH_17380	0.89	-0.2
3,670,721	+		OLJFJH_17380	0.89	-0.1
3,670,722	-		OLJFJH_17380	0.89	-0.1
3,670,722	-		OLJFJH_17380	0.89	+1.8
3,670,722	-		OLJFJH_17380	0.89	-0.5
3,670,796	+				-0.6
3,670,796	+				-1.3
3,670,797	-				+0.8
3,670,797	-				+0.9
3,671,000	+				-0.7
3,671,001	-				+1.2
3,671,078	+				+0.3
3,671,089	-				+0.5
3,671,106	-				+1.5
3,671,122	+				-0.8
3,671,264	+				+0.2
3,671,287	-				+0.4
3,671,360	-				-0.2
3,671,410	-				+1.0
3,671,473	-				-0.1
3,671,474	+				+1.1
3,671,474	+				-0.5
3,671,474	+				+1.0
3,671,560	+		OLJFJH_17385	0.14	-1.0
3,671,561	-		OLJFJH_17385	0.14	+0.5
3,671,561	-		OLJFJH_17385	0.14	-0.2
3,671,570	-		OLJFJH_17385	0.17	+0.3
3,671,570	-		OLJFJH_17385	0.17	+0.5
3,671,686	+		OLJFJH_17385	0.47	-0.7
3,671,686	+		OLJFJH_17385	0.47	-1.3
3,671,687	-		OLJFJH_17385	0.48	-0.9
3,671,687	-		OLJFJH_17385	0.48	-2.7
3,671,769	+		OLJFJH_17385	0.70	+0.1
3,671,769	+		OLJFJH_17385	0.70	-0.7
3,671,770	-		OLJFJH_17385	0.70	-0.2
3,671,813	+		OLJFJH_17385	0.81	+0.0
3,671,813	+		OLJFJH_17385	0.81	-1.0
3,671,814	-		OLJFJH_17385	0.82	+0.4
3,671,814	-		OLJFJH_17385	0.82	+1.9
3,671,814	-		OLJFJH_17385	0.82	-1.8
3,671,840	+		OLJFJH_17385	0.89	-0.4
3,671,841	-		OLJFJH_17385	0.89	+0.6
3,671,946	-				+1.1