Strain Fitness in Erwinia amylovora T8 around OLJFJH_06835

Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2
1,388,306	+		OLJFJH_06830	0.31	-0.1
1,388,314	+		OLJFJH_06830	0.31	-0.0
1,388,314	+		OLJFJH_06830	0.31	+1.9
1,388,315	-		OLJFJH_06830	0.31	-0.6
1,388,315	-		OLJFJH_06830	0.31	-1.5
1,388,315	-		OLJFJH_06830	0.31	-3.0
1,388,315	-		OLJFJH_06830	0.31	+1.3
1,388,318	+		OLJFJH_06830	0.32	-0.3
1,388,318	+		OLJFJH_06830	0.32	-0.4
1,388,318	+		OLJFJH_06830	0.32	-0.5
1,388,319	-		OLJFJH_06830	0.32	+0.6
1,388,469	-		OLJFJH_06830	0.45	+1.3
1,388,611	+		OLJFJH_06830	0.57	+1.0
1,388,611	+		OLJFJH_06830	0.57	+0.2
1,388,612	-		OLJFJH_06830	0.57	-0.2
1,388,746	+		OLJFJH_06830	0.68	-0.1
1,388,746	+		OLJFJH_06830	0.68	+0.9
1,388,746	+		OLJFJH_06830	0.68	+0.4
1,388,746	+		OLJFJH_06830	0.68	-0.2
1,388,746	+		OLJFJH_06830	0.68	+0.0
1,388,751	-		OLJFJH_06830	0.68	-0.3
1,388,751	-		OLJFJH_06830	0.68	+0.1
1,388,763	-		OLJFJH_06830	0.69	-0.5
1,388,769	+		OLJFJH_06830	0.70	-0.7
1,388,777	+		OLJFJH_06830	0.71	+0.3
1,388,887	+		OLJFJH_06830	0.80	-1.1
1,388,887	+		OLJFJH_06830	0.80	+0.3
1,388,887	+		OLJFJH_06830	0.80	-1.1
1,388,888	-		OLJFJH_06830	0.80	+1.1
1,388,888	-		OLJFJH_06830	0.80	-0.8
1,388,888	-		OLJFJH_06830	0.80	+0.5
1,388,888	-		OLJFJH_06830	0.80	-0.1
1,388,888	-		OLJFJH_06830	0.80	-0.4
1,388,892	-		OLJFJH_06830	0.80	+0.4
1,388,969	+		OLJFJH_06830	0.87	-0.9
1,389,014	-				-0.1
1,389,047	+				-1.3
1,389,048	-				+0.0
1,389,048	-				-0.5
1,389,083	+				-0.4
1,389,102	+				+0.9
1,389,195	+				+0.1
1,389,301	+		OLJFJH_06835	0.11	-1.3
1,389,326	+		OLJFJH_06835	0.13	-0.8
1,389,328	+		OLJFJH_06835	0.14	-1.3
1,389,329	-		OLJFJH_06835	0.14	-1.3
1,389,329	-		OLJFJH_06835	0.14	+0.7
1,389,360	-		OLJFJH_06835	0.17	-0.6
1,389,365	-		OLJFJH_06835	0.17	-0.1
1,389,476	-		OLJFJH_06835	0.28	+0.2
1,389,488	+		OLJFJH_06835	0.29	-0.1
1,389,489	-		OLJFJH_06835	0.29	-2.0
1,389,608	-		OLJFJH_06835	0.41	-0.3
1,389,700	+		OLJFJH_06835	0.50	-0.3
1,389,701	-		OLJFJH_06835	0.50	+0.2
1,389,732	+		OLJFJH_06835	0.53	+1.1
1,389,765	-		OLJFJH_06835	0.56	-1.9
1,389,841	+		OLJFJH_06835	0.64	-0.3
1,389,842	-		OLJFJH_06835	0.64	-0.3
1,389,842	-		OLJFJH_06835	0.64	-0.1
1,389,844	+		OLJFJH_06835	0.64	-0.2
1,389,844	+		OLJFJH_06835	0.64	-1.1
1,389,849	+		OLJFJH_06835	0.64	-1.4
1,389,849	+		OLJFJH_06835	0.64	-0.5
1,389,863	+		OLJFJH_06835	0.66	+1.0
1,389,899	+		OLJFJH_06835	0.69	+0.9
1,389,900	-		OLJFJH_06835	0.69	-0.3
1,389,902	+		OLJFJH_06835	0.69	-0.3
1,389,902	+		OLJFJH_06835	0.69	-2.1
1,389,905	+		OLJFJH_06835	0.70	-1.0
1,389,905	+		OLJFJH_06835	0.70	-0.6
1,389,905	+		OLJFJH_06835	0.70	+0.1
1,389,972	-		OLJFJH_06835	0.76	-0.2
1,389,973	+		OLJFJH_06835	0.76	-0.9
1,389,974	-		OLJFJH_06835	0.77	-1.6
1,390,067	-		OLJFJH_06835	0.86	+0.4
1,390,123	-				+1.1
1,390,215	-				-1.6
1,390,453	+				+0.7
1,390,467	+				-0.6
1,390,467	+				+0.2
1,390,468	-				+1.5
1,390,469	+				-0.3
1,390,469	+				+0.1
1,390,469	+				-1.3
1,390,470	-				-0.4
1,390,551	+				+0.7
1,390,551	+				+1.6
1,390,551	+				+0.5
1,390,551	+				+0.4
1,390,551	+				+0.6
1,390,552	-				-1.2
1,390,552	-				-1.4
1,390,553	+				+0.6
1,390,553	+				-1.2
1,390,605	+				+0.1
1,390,605	+				+2.1
1,390,605	+				-0.2
1,390,605	+				+0.1
1,390,606	+				-1.4
1,390,606	-				-0.2
1,390,606	-				-0.8
1,390,606	-				-0.8
1,390,606	-				-0.7
1,390,624	+				-2.4
1,390,651	+		OLJFJH_06840	0.11	-0.8
1,390,651	+		OLJFJH_06840	0.11	-1.6
1,390,652	-		OLJFJH_06840	0.11	-0.9
1,390,652	-		OLJFJH_06840	0.11	-0.6
1,390,652	-		OLJFJH_06840	0.11	-0.1
1,390,653	+		OLJFJH_06840	0.12	+0.9
1,390,653	+		OLJFJH_06840	0.12	-1.3
1,390,653	+		OLJFJH_06840	0.12	-0.4
1,390,654	-		OLJFJH_06840	0.12	+0.5
1,390,654	-		OLJFJH_06840	0.12	-0.0
1,390,654	-		OLJFJH_06840	0.12	-0.3
1,390,654	-		OLJFJH_06840	0.12	-0.1
1,390,749	-		OLJFJH_06840	0.22	-0.1
1,390,860	+		OLJFJH_06840	0.34	+2.3
1,390,970	-		OLJFJH_06840	0.46	+0.7
1,390,997	-		OLJFJH_06840	0.49	-0.6
1,390,997	-		OLJFJH_06840	0.49	-0.2
1,390,999	+		OLJFJH_06840	0.49	+0.9
1,391,000	-		OLJFJH_06840	0.49	+0.8
1,391,120	+		OLJFJH_06840	0.62	+0.7
1,391,120	+		OLJFJH_06840	0.62	+0.1