Experiment: Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03330 and OLJFJH_03335 are separated by 506 nucleotides OLJFJH_03335 and OLJFJH_03340 are separated by 162 nucleotides OLJFJH_03340 and OLJFJH_03345 overlap by 4 nucleotides
OLJFJH_03330: OLJFJH_03330 - glutamate/aspartate:proton symporter GltP, at 634,992 to 636,293
_03330
OLJFJH_03335: OLJFJH_03335 - acetate--CoA ligase, at 636,800 to 638,755
_03335
OLJFJH_03340: OLJFJH_03340 - DUF485 domain-containing protein, at 638,918 to 639,229
_03340
OLJFJH_03345: OLJFJH_03345 - Cation/acetate symporter ActP, at 639,226 to 640,884
_03345
Position (kb) 636
637
638
639 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 635.883 kb on - strand, within OLJFJH_03330 at 635.920 kb on + strand, within OLJFJH_03330 at 635.921 kb on - strand, within OLJFJH_03330 at 635.925 kb on - strand, within OLJFJH_03330 at 635.931 kb on - strand, within OLJFJH_03330 at 635.931 kb on - strand, within OLJFJH_03330 at 635.949 kb on - strand, within OLJFJH_03330 at 635.954 kb on + strand, within OLJFJH_03330 at 635.954 kb on + strand, within OLJFJH_03330 at 635.955 kb on - strand, within OLJFJH_03330 at 636.034 kb on + strand, within OLJFJH_03330 at 636.034 kb on + strand, within OLJFJH_03330 at 636.035 kb on - strand, within OLJFJH_03330 at 636.156 kb on - strand, within OLJFJH_03330 at 636.244 kb on - strand at 636.258 kb on + strand at 636.258 kb on + strand at 636.391 kb on + strand at 636.392 kb on - strand at 636.392 kb on - strand at 636.392 kb on - strand at 636.392 kb on - strand at 636.466 kb on + strand at 636.578 kb on - strand at 636.603 kb on + strand at 636.677 kb on + strand at 636.677 kb on + strand at 636.694 kb on + strand at 636.743 kb on - strand at 636.814 kb on + strand at 636.814 kb on + strand at 636.814 kb on + strand at 636.815 kb on - strand at 636.815 kb on - strand at 636.818 kb on + strand at 636.818 kb on + strand at 636.855 kb on + strand at 636.876 kb on + strand at 636.876 kb on + strand at 636.876 kb on + strand at 636.876 kb on + strand at 636.877 kb on - strand at 636.877 kb on - strand at 636.881 kb on + strand at 636.881 kb on + strand at 636.881 kb on + strand at 636.882 kb on - strand at 636.882 kb on - strand at 637.008 kb on - strand, within OLJFJH_03335 at 637.008 kb on - strand, within OLJFJH_03335 at 637.008 kb on - strand, within OLJFJH_03335 at 637.085 kb on - strand, within OLJFJH_03335 at 637.124 kb on - strand, within OLJFJH_03335 at 637.124 kb on - strand, within OLJFJH_03335 at 637.124 kb on - strand, within OLJFJH_03335 at 637.150 kb on - strand, within OLJFJH_03335 at 637.150 kb on - strand, within OLJFJH_03335 at 637.150 kb on - strand, within OLJFJH_03335 at 637.150 kb on - strand, within OLJFJH_03335 at 637.211 kb on + strand, within OLJFJH_03335 at 637.211 kb on + strand, within OLJFJH_03335 at 637.211 kb on + strand, within OLJFJH_03335 at 637.211 kb on + strand, within OLJFJH_03335 at 637.211 kb on + strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.212 kb on - strand, within OLJFJH_03335 at 637.214 kb on - strand, within OLJFJH_03335 at 637.214 kb on - strand, within OLJFJH_03335 at 637.282 kb on + strand, within OLJFJH_03335 at 637.586 kb on + strand, within OLJFJH_03335 at 637.586 kb on + strand, within OLJFJH_03335 at 637.588 kb on + strand, within OLJFJH_03335 at 637.588 kb on + strand, within OLJFJH_03335 at 637.589 kb on - strand, within OLJFJH_03335 at 637.628 kb on - strand, within OLJFJH_03335 at 637.650 kb on - strand, within OLJFJH_03335 at 637.671 kb on - strand, within OLJFJH_03335 at 637.700 kb on + strand, within OLJFJH_03335 at 637.700 kb on + strand, within OLJFJH_03335 at 637.700 kb on + strand, within OLJFJH_03335 at 637.701 kb on - strand, within OLJFJH_03335 at 637.742 kb on + strand, within OLJFJH_03335 at 637.752 kb on - strand, within OLJFJH_03335 at 637.752 kb on - strand, within OLJFJH_03335 at 637.823 kb on - strand, within OLJFJH_03335 at 637.823 kb on - strand, within OLJFJH_03335 at 637.862 kb on + strand, within OLJFJH_03335 at 637.863 kb on - strand, within OLJFJH_03335 at 637.863 kb on - strand, within OLJFJH_03335 at 637.863 kb on - strand, within OLJFJH_03335 at 637.907 kb on - strand, within OLJFJH_03335 at 637.956 kb on + strand, within OLJFJH_03335 at 638.033 kb on - strand, within OLJFJH_03335 at 638.159 kb on - strand, within OLJFJH_03335 at 638.229 kb on + strand, within OLJFJH_03335 at 638.261 kb on + strand, within OLJFJH_03335 at 638.261 kb on + strand, within OLJFJH_03335 at 638.261 kb on + strand, within OLJFJH_03335 at 638.262 kb on - strand, within OLJFJH_03335 at 638.355 kb on + strand, within OLJFJH_03335 at 638.355 kb on + strand, within OLJFJH_03335 at 638.477 kb on + strand, within OLJFJH_03335 at 638.477 kb on + strand, within OLJFJH_03335 at 638.477 kb on + strand, within OLJFJH_03335 at 638.478 kb on - strand, within OLJFJH_03335 at 638.478 kb on - strand, within OLJFJH_03335 at 638.483 kb on + strand, within OLJFJH_03335 at 638.483 kb on + strand, within OLJFJH_03335 at 638.484 kb on - strand, within OLJFJH_03335 at 638.484 kb on - strand, within OLJFJH_03335 at 638.484 kb on - strand, within OLJFJH_03335 at 638.484 kb on - strand, within OLJFJH_03335 at 638.484 kb on - strand, within OLJFJH_03335 at 638.485 kb on + strand, within OLJFJH_03335 at 638.485 kb on + strand, within OLJFJH_03335 at 638.485 kb on + strand, within OLJFJH_03335 at 638.486 kb on - strand, within OLJFJH_03335 at 638.487 kb on + strand, within OLJFJH_03335 at 638.525 kb on + strand, within OLJFJH_03335 at 638.526 kb on - strand, within OLJFJH_03335 at 638.689 kb on + strand at 638.690 kb on - strand at 638.722 kb on - strand at 638.795 kb on + strand at 638.795 kb on + strand at 638.795 kb on + strand at 638.796 kb on - strand at 638.796 kb on - strand at 638.798 kb on + strand at 638.820 kb on + strand at 638.837 kb on + strand at 638.837 kb on + strand at 638.837 kb on + strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.838 kb on - strand at 638.841 kb on + strand at 639.026 kb on + strand, within OLJFJH_03340 at 639.026 kb on + strand, within OLJFJH_03340 at 639.027 kb on - strand, within OLJFJH_03340 at 639.027 kb on - strand, within OLJFJH_03340 at 639.083 kb on + strand, within OLJFJH_03340 at 639.162 kb on - strand, within OLJFJH_03340 at 639.162 kb on - strand, within OLJFJH_03340 at 639.162 kb on - strand, within OLJFJH_03340 at 639.399 kb on + strand, within OLJFJH_03345 at 639.400 kb on - strand, within OLJFJH_03345 at 639.421 kb on + strand, within OLJFJH_03345 at 639.421 kb on + strand, within OLJFJH_03345 at 639.421 kb on + strand, within OLJFJH_03345 at 639.520 kb on + strand, within OLJFJH_03345 at 639.543 kb on + strand, within OLJFJH_03345 at 639.544 kb on - strand, within OLJFJH_03345 at 639.548 kb on - strand, within OLJFJH_03345 at 639.580 kb on - strand, within OLJFJH_03345 at 639.624 kb on + strand, within OLJFJH_03345 at 639.625 kb on - strand, within OLJFJH_03345
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:17;Samp:6-2 remove 635,883 - OLJFJH_03330 0.68 +0.1 635,920 + OLJFJH_03330 0.71 -0.8 635,921 - OLJFJH_03330 0.71 -0.5 635,925 - OLJFJH_03330 0.72 +1.0 635,931 - OLJFJH_03330 0.72 +1.1 635,931 - OLJFJH_03330 0.72 +0.6 635,949 - OLJFJH_03330 0.74 -0.3 635,954 + OLJFJH_03330 0.74 -0.2 635,954 + OLJFJH_03330 0.74 -0.2 635,955 - OLJFJH_03330 0.74 +0.5 636,034 + OLJFJH_03330 0.80 -1.5 636,034 + OLJFJH_03330 0.80 +0.1 636,035 - OLJFJH_03330 0.80 +1.3 636,156 - OLJFJH_03330 0.89 +0.5 636,244 - +0.1 636,258 + +0.0 636,258 + -0.1 636,391 + +0.1 636,392 - +0.6 636,392 - +0.0 636,392 - -0.6 636,392 - +0.9 636,466 + +0.1 636,578 - -0.3 636,603 + -0.3 636,677 + +2.3 636,677 + +0.5 636,694 + +0.6 636,743 - +0.3 636,814 + +0.4 636,814 + +0.2 636,814 + -0.2 636,815 - +0.2 636,815 - +1.6 636,818 + +0.1 636,818 + -0.9 636,855 + +2.4 636,876 + +0.2 636,876 + -1.0 636,876 + -0.4 636,876 + +1.1 636,877 - +1.0 636,877 - -2.0 636,881 + +0.2 636,881 + -0.3 636,881 + -1.5 636,882 - -0.8 636,882 - -0.5 637,008 - OLJFJH_03335 0.11 -0.3 637,008 - OLJFJH_03335 0.11 +0.2 637,008 - OLJFJH_03335 0.11 +0.0 637,085 - OLJFJH_03335 0.15 +0.5 637,124 - OLJFJH_03335 0.17 -0.0 637,124 - OLJFJH_03335 0.17 +0.2 637,124 - OLJFJH_03335 0.17 -0.1 637,150 - OLJFJH_03335 0.18 -0.1 637,150 - OLJFJH_03335 0.18 -0.4 637,150 - OLJFJH_03335 0.18 -0.3 637,150 - OLJFJH_03335 0.18 +0.3 637,211 + OLJFJH_03335 0.21 -0.0 637,211 + OLJFJH_03335 0.21 +0.1 637,211 + OLJFJH_03335 0.21 -0.6 637,211 + OLJFJH_03335 0.21 -0.5 637,211 + OLJFJH_03335 0.21 +0.2 637,212 - OLJFJH_03335 0.21 -1.5 637,212 - OLJFJH_03335 0.21 +0.1 637,212 - OLJFJH_03335 0.21 +0.2 637,212 - OLJFJH_03335 0.21 -0.2 637,212 - OLJFJH_03335 0.21 +0.3 637,212 - OLJFJH_03335 0.21 -0.1 637,212 - OLJFJH_03335 0.21 +1.0 637,212 - OLJFJH_03335 0.21 +0.4 637,212 - OLJFJH_03335 0.21 +0.3 637,212 - OLJFJH_03335 0.21 +0.1 637,212 - OLJFJH_03335 0.21 -0.7 637,212 - OLJFJH_03335 0.21 -0.3 637,212 - OLJFJH_03335 0.21 -0.6 637,214 - OLJFJH_03335 0.21 -1.2 637,214 - OLJFJH_03335 0.21 -0.3 637,282 + OLJFJH_03335 0.25 -0.8 637,586 + OLJFJH_03335 0.40 -0.6 637,586 + OLJFJH_03335 0.40 -0.9 637,588 + OLJFJH_03335 0.40 -0.6 637,588 + OLJFJH_03335 0.40 -0.5 637,589 - OLJFJH_03335 0.40 -0.6 637,628 - OLJFJH_03335 0.42 -1.3 637,650 - OLJFJH_03335 0.43 +0.7 637,671 - OLJFJH_03335 0.45 -1.6 637,700 + OLJFJH_03335 0.46 +1.3 637,700 + OLJFJH_03335 0.46 -0.6 637,700 + OLJFJH_03335 0.46 +0.1 637,701 - OLJFJH_03335 0.46 +0.2 637,742 + OLJFJH_03335 0.48 +0.2 637,752 - OLJFJH_03335 0.49 +0.0 637,752 - OLJFJH_03335 0.49 -0.2 637,823 - OLJFJH_03335 0.52 +0.1 637,823 - OLJFJH_03335 0.52 -0.4 637,862 + OLJFJH_03335 0.54 +0.8 637,863 - OLJFJH_03335 0.54 -3.0 637,863 - OLJFJH_03335 0.54 -0.3 637,863 - OLJFJH_03335 0.54 -0.5 637,907 - OLJFJH_03335 0.57 -1.3 637,956 + OLJFJH_03335 0.59 +0.4 638,033 - OLJFJH_03335 0.63 -0.8 638,159 - OLJFJH_03335 0.69 +0.1 638,229 + OLJFJH_03335 0.73 -2.8 638,261 + OLJFJH_03335 0.75 +0.2 638,261 + OLJFJH_03335 0.75 -0.1 638,261 + OLJFJH_03335 0.75 -0.2 638,262 - OLJFJH_03335 0.75 -1.8 638,355 + OLJFJH_03335 0.79 +0.1 638,355 + OLJFJH_03335 0.79 -0.2 638,477 + OLJFJH_03335 0.86 +0.9 638,477 + OLJFJH_03335 0.86 +0.1 638,477 + OLJFJH_03335 0.86 +0.0 638,478 - OLJFJH_03335 0.86 +0.9 638,478 - OLJFJH_03335 0.86 -0.8 638,483 + OLJFJH_03335 0.86 -0.4 638,483 + OLJFJH_03335 0.86 -0.4 638,484 - OLJFJH_03335 0.86 -0.1 638,484 - OLJFJH_03335 0.86 -0.1 638,484 - OLJFJH_03335 0.86 -0.7 638,484 - OLJFJH_03335 0.86 -0.4 638,484 - OLJFJH_03335 0.86 +0.3 638,485 + OLJFJH_03335 0.86 -1.2 638,485 + OLJFJH_03335 0.86 -0.9 638,485 + OLJFJH_03335 0.86 -2.0 638,486 - OLJFJH_03335 0.86 -0.1 638,487 + OLJFJH_03335 0.86 +0.5 638,525 + OLJFJH_03335 0.88 -0.4 638,526 - OLJFJH_03335 0.88 +0.3 638,689 + -0.2 638,690 - +0.2 638,722 - -0.9 638,795 + +0.2 638,795 + -0.3 638,795 + +0.3 638,796 - +0.7 638,796 - +3.0 638,798 + -1.0 638,820 + -0.7 638,837 + -0.0 638,837 + +0.3 638,837 + -1.3 638,838 - -0.4 638,838 - -0.3 638,838 - -0.1 638,838 - -0.1 638,838 - +2.0 638,838 - +0.0 638,838 - -0.2 638,838 - +0.9 638,838 - +1.6 638,838 - -0.7 638,838 - +0.5 638,838 - -0.1 638,841 + -1.1 639,026 + OLJFJH_03340 0.35 +0.5 639,026 + OLJFJH_03340 0.35 -0.2 639,027 - OLJFJH_03340 0.35 +0.3 639,027 - OLJFJH_03340 0.35 -0.0 639,083 + OLJFJH_03340 0.53 +0.3 639,162 - OLJFJH_03340 0.78 +0.3 639,162 - OLJFJH_03340 0.78 -0.8 639,162 - OLJFJH_03340 0.78 +0.9 639,399 + OLJFJH_03345 0.10 -0.6 639,400 - OLJFJH_03345 0.10 +0.5 639,421 + OLJFJH_03345 0.12 +1.2 639,421 + OLJFJH_03345 0.12 -0.6 639,421 + OLJFJH_03345 0.12 +1.3 639,520 + OLJFJH_03345 0.18 -0.3 639,543 + OLJFJH_03345 0.19 -0.6 639,544 - OLJFJH_03345 0.19 -1.1 639,548 - OLJFJH_03345 0.19 -0.9 639,580 - OLJFJH_03345 0.21 -0.5 639,624 + OLJFJH_03345 0.24 -0.2 639,625 - OLJFJH_03345 0.24 +0.1
Or see this region's nucleotide sequence