Strain Fitness in Escherichia coli ECOR27 around NOLOHH_16805

Experiment: L-Rhamnose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntNOLOHH_16800 and NOLOHH_16805 are separated by 2 nucleotidesNOLOHH_16805 and NOLOHH_16810 are separated by 17 nucleotides NOLOHH_16800: NOLOHH_16800 - sugar ABC transporter permease, at 3,302,980 to 3,304,269 _16800 NOLOHH_16805: NOLOHH_16805 - maltose ABC transporter permease, at 3,304,272 to 3,305,105 _16805 NOLOHH_16810: NOLOHH_16810 - alpha-glycosidase, at 3,305,123 to 3,306,922 _16810 Position (kb) 3304 3305 3306Strain fitness (log2 ratio) -3 -2 -1 0 1at 3304.792 kb on + strand, within NOLOHH_16805at 3305.068 kb on + strandat 3305.068 kb on + strandat 3305.172 kb on - strandat 3305.260 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Rhamnose
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3,304,792 + NOLOHH_16805 0.62 -1.7
3,305,068 + -3.2
3,305,068 + +0.9
3,305,172 - +1.3
3,305,260 + -0.5

Or see this region's nucleotide sequence