Strain Fitness in Escherichia coli ECOR27 around NOLOHH_11370

Experiment: L-Rhamnose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose
2,200,790	+				+2.0
2,200,791	-				+1.4
2,200,792	+				-0.6
2,200,792	+				-2.2
2,200,792	+				+0.7
2,200,792	+				-0.9
2,200,792	+				-1.6
2,200,792	+				+0.2
2,200,792	+				-2.2
2,200,792	+				-1.4
2,200,792	+				+0.3
2,200,793	-				-1.2
2,200,907	-	rpiA	NOLOHH_11365	0.12	+0.3
2,200,910	+	rpiA	NOLOHH_11365	0.12	-1.0
2,200,934	+	rpiA	NOLOHH_11365	0.16	-0.5
2,201,064	+	rpiA	NOLOHH_11365	0.35	-1.4
2,201,064	+	rpiA	NOLOHH_11365	0.35	-2.3
2,201,065	-	rpiA	NOLOHH_11365	0.36	-0.9
2,201,065	-	rpiA	NOLOHH_11365	0.36	-0.7
2,201,169	-	rpiA	NOLOHH_11365	0.51	-1.5
2,201,386	+	rpiA	NOLOHH_11365	0.84	-0.7
2,201,585	+				+0.5
2,201,586	-				-0.3
2,201,619	+				+0.3
2,201,663	+				-1.4
2,201,664	-				-4.8
2,201,664	-				-1.6
2,201,677	+				-3.8
2,201,678	-				-3.9
2,201,687	+				-4.1
2,201,741	+				-4.0
2,201,741	+				-4.7
2,201,776	+				-2.4
2,201,776	+				-0.8
2,201,994	+	serA	NOLOHH_11370	0.20	-3.1
2,202,049	+	serA	NOLOHH_11370	0.25	-3.7
2,202,049	+	serA	NOLOHH_11370	0.25	-5.0
2,202,049	+	serA	NOLOHH_11370	0.25	-3.7
2,202,232	+	serA	NOLOHH_11370	0.40	-4.4
2,202,269	+	serA	NOLOHH_11370	0.43	-4.8
2,202,269	+	serA	NOLOHH_11370	0.43	-3.4
2,202,269	+	serA	NOLOHH_11370	0.43	-2.2
2,202,269	+	serA	NOLOHH_11370	0.43	-4.6
2,202,270	-	serA	NOLOHH_11370	0.43	-2.3
2,202,270	-	serA	NOLOHH_11370	0.43	-3.6
2,202,270	-	serA	NOLOHH_11370	0.43	-3.8
2,202,270	-	serA	NOLOHH_11370	0.43	-4.2
2,202,270	-	serA	NOLOHH_11370	0.43	-3.1
2,202,281	+	serA	NOLOHH_11370	0.44	-4.4
2,202,281	+	serA	NOLOHH_11370	0.44	-4.8
2,202,325	-	serA	NOLOHH_11370	0.47	-4.2
2,202,325	-	serA	NOLOHH_11370	0.47	-3.8
2,202,325	-	serA	NOLOHH_11370	0.47	-3.6
2,202,325	-	serA	NOLOHH_11370	0.47	-2.1
2,202,349	+	serA	NOLOHH_11370	0.49	-3.7
2,202,350	-	serA	NOLOHH_11370	0.49	-4.3
2,202,375	+	serA	NOLOHH_11370	0.51	-5.2
2,202,375	+	serA	NOLOHH_11370	0.51	-4.3
2,202,375	+	serA	NOLOHH_11370	0.51	-4.3
2,202,376	-	serA	NOLOHH_11370	0.51	-1.2
2,202,376	-	serA	NOLOHH_11370	0.51	-3.7
2,202,376	-	serA	NOLOHH_11370	0.51	+1.3
2,202,400	+	serA	NOLOHH_11370	0.53	-3.4
2,202,401	-	serA	NOLOHH_11370	0.53	-5.2
2,202,538	-	serA	NOLOHH_11370	0.64	-3.4
2,202,574	+	serA	NOLOHH_11370	0.67	-3.9
2,202,574	+	serA	NOLOHH_11370	0.67	-2.2
2,202,652	+	serA	NOLOHH_11370	0.74	-2.8
2,202,686	+	serA	NOLOHH_11370	0.76	-3.0
2,202,686	+	serA	NOLOHH_11370	0.76	-2.8
2,202,687	-	serA	NOLOHH_11370	0.76	-4.2
2,202,796	-	serA	NOLOHH_11370	0.85	-0.2
2,202,852	+	serA	NOLOHH_11370	0.90	-5.4
2,202,875	+				-4.2
2,202,876	-				-4.3
2,202,879	+				-4.2
2,202,879	+				-2.4
2,202,879	+				-4.6
2,202,879	+				-0.9
2,202,879	+				-4.0
2,202,879	+				-3.1
2,202,880	-				-3.7
2,202,880	-				-5.4
2,202,880	-				-4.7
2,202,880	-				-1.7
2,202,883	+				-1.3
2,202,889	+				-5.4
2,202,971	+				-0.8
2,202,971	+				+0.3
2,202,974	+				-0.9
2,202,975	-				-2.7
2,203,134	-				+0.3
2,203,166	-				-1.7
2,203,224	+		NOLOHH_11380	0.32	+1.1
2,203,225	-		NOLOHH_11380	0.33	-0.7
2,203,233	+		NOLOHH_11380	0.47	-0.4
2,203,234	-		NOLOHH_11380	0.48	+0.0
2,203,234	-		NOLOHH_11380	0.48	-0.4
2,203,234	-		NOLOHH_11380	0.48	-1.7
2,203,234	-		NOLOHH_11380	0.48	+0.6
2,203,245	+		NOLOHH_11380	0.67	-0.0
2,203,259	+				+1.8
2,203,260	-				+1.2
2,203,263	-				+0.8
2,203,406	-				+0.7
2,203,414	-				-1.0
2,203,414	-				+0.1
2,203,416	+				-2.4
2,203,416	+				-3.1
2,203,416	+				-1.3
2,203,417	-				+0.2
2,203,417	-				+0.6
2,203,525	+				+1.7
2,203,525	+				+1.0
2,203,616	+		NOLOHH_11390	0.32	+1.8
2,203,617	-		NOLOHH_11390	0.33	-0.2
2,203,617	-		NOLOHH_11390	0.33	+1.3
2,203,617	-		NOLOHH_11390	0.33	+0.0
2,203,625	+		NOLOHH_11390	0.47	+0.5
2,203,625	+		NOLOHH_11390	0.47	-1.2
2,203,625	+		NOLOHH_11390	0.47	-2.2
2,203,637	+		NOLOHH_11390	0.67	-0.7
2,203,637	+		NOLOHH_11390	0.67	-0.8
2,203,637	+		NOLOHH_11390	0.67	+0.6
2,203,637	+		NOLOHH_11390	0.67	-0.0
2,203,638	-		NOLOHH_11390	0.68	+0.0
2,203,638	-		NOLOHH_11390	0.68	-3.8
2,203,638	-		NOLOHH_11390	0.68	-0.4
2,203,638	-		NOLOHH_11390	0.68	-0.3
2,203,651	+				-0.1
2,203,652	-				-0.7
2,203,655	-				-0.7
2,203,655	-				-1.0
2,203,655	-				-0.7
2,203,695	+				-3.6
2,203,784	-				-4.7
2,203,873	+	ygfA	NOLOHH_11395	0.19	-1.3
2,203,873	+	ygfA	NOLOHH_11395	0.19	-0.4
2,203,874	-	ygfA	NOLOHH_11395	0.19	-0.3
2,203,874	-	ygfA	NOLOHH_11395	0.19	+1.0
2,203,875	+	ygfA	NOLOHH_11395	0.20	-1.5
2,203,876	-	ygfA	NOLOHH_11395	0.20	-1.2
2,203,876	-	ygfA	NOLOHH_11395	0.20	-3.5
2,203,876	-	ygfA	NOLOHH_11395	0.20	-0.9
2,203,892	+	ygfA	NOLOHH_11395	0.22	-1.8