Strain Fitness in Erwinia amylovora T8 around OLJFJH_13885

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
2,924,590	-		OLJFJH_13880	0.23	-0.1
2,924,593	+		OLJFJH_13880	0.23	+0.9
2,924,594	-		OLJFJH_13880	0.23	+0.2
2,924,642	-		OLJFJH_13880	0.30	+0.8
2,924,856	-		OLJFJH_13880	0.59	-0.7
2,924,895	+		OLJFJH_13880	0.64	-0.1
2,925,139	+				+0.7
2,925,154	-				+0.4
2,925,163	+				-0.4
2,925,163	+				-0.1
2,925,163	+				-0.0
2,925,163	+				-0.3
2,925,164	-				-0.7
2,925,166	-				+0.2
2,925,178	+				-0.6
2,925,179	-				-0.0
2,925,216	-				+0.2
2,925,216	-				-0.2
2,925,216	-				-0.9
2,925,260	+				-0.0
2,925,261	-				+0.0
2,925,296	-				+0.4
2,925,304	+				+0.5
2,925,306	+				+0.0
2,925,307	-				-0.5
2,925,307	-				+0.8
2,925,307	-				+0.0
2,925,307	-				+4.3
2,925,315	+				-0.0
2,925,329	+				-1.1
2,925,365	+				-0.1
2,925,366	-				-0.1
2,925,436	-		OLJFJH_13885	0.13	-1.4
2,925,436	-		OLJFJH_13885	0.13	-0.9
2,925,436	-		OLJFJH_13885	0.13	-0.1
2,925,438	-		OLJFJH_13885	0.13	-1.0
2,925,500	+		OLJFJH_13885	0.28	-1.9
2,925,587	+		OLJFJH_13885	0.49	-0.7
2,925,618	-		OLJFJH_13885	0.57	-2.4
2,925,681	+		OLJFJH_13885	0.72	+0.0
2,925,921	+				-0.4
2,925,921	+				-0.0
2,925,921	+				+0.0
2,925,921	+				-0.6
2,925,922	-				-0.1
2,925,922	-				-1.1
2,925,923	+				+0.5
2,926,082	-		OLJFJH_13890	0.20	+0.1
2,926,116	+		OLJFJH_13890	0.23	+0.4
2,926,116	+		OLJFJH_13890	0.23	-0.2
2,926,121	+		OLJFJH_13890	0.23	-0.0
2,926,121	+		OLJFJH_13890	0.23	+0.2
2,926,375	-		OLJFJH_13890	0.41	+1.0
2,926,456	+		OLJFJH_13890	0.47	-1.2
2,926,456	+		OLJFJH_13890	0.47	+0.1
2,926,456	+		OLJFJH_13890	0.47	+1.6
2,926,457	-		OLJFJH_13890	0.47	+0.9
2,926,457	-		OLJFJH_13890	0.47	-0.8
2,926,457	-		OLJFJH_13890	0.47	+1.4
2,926,457	-		OLJFJH_13890	0.47	-0.4
2,926,461	-		OLJFJH_13890	0.48	+0.1
2,926,768	-		OLJFJH_13890	0.70	-0.2
2,926,768	-		OLJFJH_13890	0.70	-0.8