Strain Fitness in Erwinia amylovora T8 around OLJFJH_09590

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3
1,984,582	-				-2.1
1,984,582	-				-1.1
1,984,626	+				-0.5
1,984,641	+				+0.3
1,984,641	+				+0.0
1,984,642	-				-2.3
1,984,649	-				-0.9
1,984,649	-				+0.6
1,984,760	+				+0.4
1,984,760	+				-0.4
1,984,761	-				-0.7
1,984,793	+				-0.5
1,984,793	+				-1.5
1,984,817	+				-0.6
1,984,817	+				+0.6
1,984,846	-				-1.2
1,984,880	+				-0.7
1,984,880	+				-0.9
1,984,880	+				-1.6
1,984,884	+				-2.8
1,984,898	-				-0.9
1,984,898	-				+0.9
1,984,898	-				+0.4
1,984,924	+				+0.4
1,984,925	-				+0.1
1,984,925	-				-0.8
1,984,925	-				+0.1
1,984,951	-				+0.1
1,984,951	-				-0.3
1,984,951	-				+0.3
1,984,952	+				+0.3
1,984,952	+				-0.0
1,984,952	+				+0.0
1,984,952	+				+0.0
1,984,952	+				-0.1
1,984,953	-				-0.9
1,984,953	-				-0.3
1,984,953	-				-1.2
1,985,162	+		OLJFJH_09590	0.80	-2.5
1,985,162	+		OLJFJH_09590	0.80	-1.2
1,985,162	+		OLJFJH_09590	0.80	-1.1
1,985,163	-		OLJFJH_09590	0.81	-1.3
1,985,193	+				-0.7
1,985,248	+				+0.8
1,985,730	+				+0.2
1,985,882	+				-0.3
1,985,920	+				-0.1
1,985,938	+				-0.7
1,985,938	+				-0.7
1,985,938	+				+0.1
1,986,003	-		OLJFJH_09605	0.34	-1.3
1,986,096	+				+0.3
1,986,133	-		OLJFJH_09610	0.34	-0.7
1,986,184	+				+0.3
1,986,184	+				+0.4
1,986,197	+				-0.3
1,986,198	-				+0.6